RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 XYLT2Q9H1B5 865 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 FLRT1Q9NZU1 646 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 SIX4Q9UIU6 781 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 LZTS1Q9Y250 596 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 FOXO6A8MYZ6 492 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 DNAJC8O75937 253 aaPredicted RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 CHEK2O96017 543 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 CTSHP09668 335 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 AKR1A1P14550 325 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 DRD4P21917 467 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 PEX5P50542 639 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 AMHR2Q16671 573 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 SPOUT1Q5T280 376 aaKnown RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 GRAMD4Q6IC98 578 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 EXOC3L1Q86VI1 746 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NUP93Q8N1F7 819 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 POU5F2Q8N7G0 328 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NRBF2Q96F24 287 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NT5C1AQ9BXI3 368 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 IL1RL2Q9HB29 575 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 CYP3A43Q9HB55 503 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 PAPOLBQ9NRJ5 636 aaKnown RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 ARHGAP26Q9UNA1 814 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 C2CD2Q9Y426 696 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 EVPLQ92817 2033 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 SMIM35A0A1B0GVV1 85 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 TCRBV7S2A1N4TA0A589 114 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 UBA6A0AVT1 1052 aaPredicted RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 MGEA5O60502 916 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 KLHL2O95198 593 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 F2P00734 622 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 PAMP19021 973 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 STIP1P31948 543 aaKnown RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 GRM5P41594 1212 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NUMBP49757 651 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NDST1P52848 882 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 COPAP53621 1224 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 DCAF6Q58WW2 860 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 MORN1Q5T089 497 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 MARCH8Q5T0T0 291 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 IYDQ6PHW0 289 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 IZUMO2Q6UXV1 221 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 SPOCD1Q6ZMY3 1216 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 SCUBE1Q8IWY4 988 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 EXD1Q8NHP7 514 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 SCG3Q8WXD2 468 aaKnown RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 THAP11Q96EK4 314 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 EIF2AQ9BY44 585 aaKnown RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NEUROG2Q9H2A3 272 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 SLC39A10Q9ULF5 831 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 ORC6Q9Y5N6 252 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 RPS6KL1Q9Y6S9 549 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 ZNFX1Q9P2E3 1918 aaKnown RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 DFFAO00273 331 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 AKAP10O43572 662 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 ENTPD5O75356 428 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 RECQL4O94761 1208 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 ACADSP16219 412 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 ELK3P41970 407 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NUDT2P50583 147 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 FCGRTP55899 365 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 CRHR2Q13324 411 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 YTHDF3Q7Z739 585 aaKnown RBP10.3□□□□□ -0.76
TRAF1-202ENST00000540010 SAPCD2Q86UD0 394 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 NCLNQ969V3 563 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 PPCSQ9HAB8 311 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 DONSONQ9NYP3 566 aa10.3□□□□□ -0.76
TRAF1-202ENST00000540010 CSPG5O95196 566 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 PAEPP09466 180 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 RARBP10826 455 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 DARSP14868 501 aaKnown RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ZFXP17010 805 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 GPD1P21695 349 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 PLEKHA7Q6IQ23 1121 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 IFNLR1Q8IU57 520 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 TTC39CQ8N584 583 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 SNRNP27Q8WVK2 155 aaKnown RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 APOL2Q9BQE5 337 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 NXF3Q9H4D5 531 aaKnown RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 WDR81Q562E7 1941 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 S100BP04271 92 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 SERPINB5P36952 375 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 PAPOLAP51003 745 aaKnown RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 RPL10AP62906 217 aaKnown RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 RNF148Q8N7C7 305 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 CAAP1Q9H8G2 361 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 BARX2Q9UMQ3 279 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 CNTN6Q9UQ52 1028 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 MAGEA13PA6NCF6 341 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 F8VP50 259 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 SPAG6O75602 509 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ITGBL1O95965 494 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 VDRP11473 427 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 RPA3P35244 121 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-202ENST00000540010 GLRBP48167 497 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 SERPINB9P50453 376 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 ZNF132P52740 706 aa10.29□□□□□ -0.76
TRAF1-202ENST00000540010 TAS2R40P59535 323 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms