RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 VDRP11473 427 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 MFAP3P55082 362 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 STILQ15468 1287 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 MPPE1Q53F39 396 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 PEAR1Q5VY43 1037 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-211ENST00000539843 FMR1NBQ8N0W7 255 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-211ENST00000539843 FRMD1Q8N878 549 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 ZNF557Q8N988 423 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-211ENST00000539843 TATDN2Q93075 761 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 TIGD1Q96MW7 591 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 NT5C1BQ96P26 610 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 ACOX2Q99424 681 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 ARID3AQ99856 593 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 ULBP1Q9BZM6 244 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 CIPCQ9C0C6 399 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 PRDM16Q9HAZ2 1276 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 ABCC13Q9NSE7 274 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 AGO1Q9UL18 857 aaKnown RBP16.01■□□□□ 0.15
UBE3B-211ENST00000539843 COQ4Q9Y3A0 265 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 HBS1LQ9Y450 684 aaKnown RBP16.01■□□□□ 0.15
UBE3B-211ENST00000539843 RAD54BQ9Y620 910 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 STON1Q9Y6Q2 735 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 MEI4A8MW99 385 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 CDX4O14627 284 aaPredicted RBP16■□□□□ 0.15
UBE3B-211ENST00000539843 CD6P30203 668 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 OXTRP30559 389 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 PDE4CQ08493 712 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 ADIGQ0VDE8 80 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 FOXC1Q12948 553 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 FYB2Q5VWT5 728 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 ANKRD40Q6AI12 368 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 PM20D1Q6GTS8 502 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 FMNL3Q8IVF7 1028 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 TRIML1Q8N9V2 468 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 PRCCQ92733 491 aaPredicted RBP16■□□□□ 0.15
UBE3B-211ENST00000539843 DHTKD1Q96HY7 919 aaPredicted RBP16■□□□□ 0.15
UBE3B-211ENST00000539843 MRGPRX1Q96LB2 322 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 HSPA12BQ96MM6 686 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 CEP63Q96MT8 703 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 TMEM74BQ9NUR3 256 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 THAP10Q9P2Z0 257 aaPredicted RBP16■□□□□ 0.15
UBE3B-211ENST00000539843 FBXO10Q9UK96 956 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 ABCA7Q8IZY2 2146 aa16■□□□□ 0.15
UBE3B-211ENST00000539843 MYOFQ9NZM1 2061 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 BICDL2A1A5D9 508 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 TYW5A2RUC4 315 aaKnown RBP15.99■□□□□ 0.15
UBE3B-211ENST00000539843 LATS1O95835 1130 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 KLKB1P03952 638 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 PAEPP09466 180 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 LRMPQ12912 555 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 HNRNPDQ14103 355 aaKnown RBP15.99■□□□□ 0.15
UBE3B-211ENST00000539843 KIAA1211LQ6NV74 962 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 SERPINA13PQ6UXR4 307 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 METTL3Q86U44 580 aaKnown RBP15.99■□□□□ 0.15
UBE3B-211ENST00000539843 CCDC117Q8IWD4 279 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-211ENST00000539843 ZC3H3Q8IXZ2 948 aaKnown RBP15.99■□□□□ 0.15
UBE3B-211ENST00000539843 DEFB119Q8N690 84 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 DEFB124Q8NES8 71 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 WFIKKN2Q8TEU8 576 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 CNGB3Q9NQW8 809 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 ELOVL2Q9NXB9 296 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 PLA2G4CQ9UP65 541 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 PCDHB4Q9Y5E5 795 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 CACNA1BQ00975 2339 aa15.99■□□□□ 0.15
UBE3B-211ENST00000539843 ARHGAP33O14559 1287 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 P4HA2O15460 535 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 FMO5P49326 533 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 TRIP4Q15650 581 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-211ENST00000539843 PLEKHG6Q3KR16 790 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 BSPRYQ5W0U4 402 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 TMEM270Q6UE05 265 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 PPM1KQ8N3J5 372 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 KCTD13Q8WZ19 329 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 NUP205Q92621 2012 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 SLC35C1Q96A29 364 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 ERLEC1Q96DZ1 483 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 SIPA1Q96FS4 1042 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 DDX50Q9BQ39 737 aaKnown RBP15.98■□□□□ 0.15
UBE3B-211ENST00000539843 HCN2Q9UL51 889 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 EPG5Q9HCE0 2579 aa15.98■□□□□ 0.15
UBE3B-211ENST00000539843 TRIM49BA6NDI0 452 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 O00370 1275 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 GIPC1O14908 333 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 GNA14O95837 355 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 EPHX1P07099 455 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 LCP1P13796 627 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 IL12RB1P42701 662 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 SLC11A2P49281 568 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 GEN1Q17RS7 908 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 FUT11Q495W5 492 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 NUGGCQ68CJ6 796 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 TMPRSS6Q8IU80 811 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 UNC45BQ8IWX7 931 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 SCML4Q8N228 414 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 UBA3Q8TBC4 463 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 IRGQQ8WZA9 623 aa15.97■□□□□ 0.15
UBE3B-211ENST00000539843 EDEM1Q92611 657 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms