RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SLC2A3P11169 496 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 RDXP35241 583 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 HADHBP55084 474 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 PITX1P78337 314 aaPredicted RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 OGDHQ02218 1023 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 FAM78AQ5JUQ0 283 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 MTSS1LQ765P7 747 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 CELF5Q8N6W0 485 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 CENPIQ92674 756 aaPredicted RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 USP13Q92995 863 aaPredicted RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 PLD4Q96BZ4 506 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 BTBD6Q96KE9 485 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 SMG9Q9H0W8 520 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 TRPV4Q9HBA0 871 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 ZFP14Q9HCL3 533 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 GKN1Q9NS71 199 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 DUSP10Q9Y6W6 482 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 EYSQ5T1H1 3165 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 LEFTY2O00292 366 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 PROSCO94903 275 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 ENDOD1O94919 500 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 TFE3P19532 575 aaPredicted RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 SP100P23497 879 aaPredicted RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 CCR1P32246 355 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 HARS2P49590 506 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 RING1Q06587 406 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 MESDQ14696 234 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 NUGGCQ68CJ6 796 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 POTEHQ6S545 545 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 UNC45BQ8IWX7 931 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 RNF10Q8N5U6 811 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 NIPA2Q8N8Q9 360 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 TTC16Q8NEE8 873 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 SH3RF2Q8TEC5 729 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 ZFRQ96KR1 1074 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 DCLK3Q9C098 648 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 LZTFL1Q9NQ48 299 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.05■□□□□ 0.16
DDB1-216ENST00000539739 OBP2AQ9NY56 170 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 SLC12A6Q9UHW9 1150 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 LSM7Q9UK45 103 aaKnown RBP16.05■□□□□ 0.16
DDB1-216ENST00000539739 PYCARDQ9ULZ3 195 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 GUCA1BQ9UMX6 200 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 SH3BP1Q9Y3L3 701 aa16.05■□□□□ 0.16
DDB1-216ENST00000539739 XIRP2A4UGR9 3374 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 BUB1O43683 1085 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 PRAMEF12O95522 483 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 APOEP02649 317 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 IRF1P10914 325 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 TCF3P15923 654 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 MTA1Q13330 715 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 EIF4EBP2Q13542 120 aaPredicted RBP16.04■□□□□ 0.16
DDB1-216ENST00000539739 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 SH3PXD2AQ5TCZ1 1133 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 BNIPLQ7Z465 357 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 CNPY4Q8N129 248 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 WDCPQ9H6R7 721 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 PIGVQ9NUD9 493 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 CFAP97Q9P2B7 532 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 CCL26Q9Y258 94 aa16.04■□□□□ 0.16
DDB1-216ENST00000539739 DENND4AQ7Z401 1863 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 A0A0U1RQJ8 604 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 TMEM110-MUSTN1A8MSY1 372 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 C2CD4DB7Z1M9 353 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 STC2O76061 302 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 IL9P15248 144 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 MAN1A1P33908 653 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 CXCR3P49682 368 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 ZNF252P-AS1Q0IIN9 211 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 PPP2R5DQ14738 602 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 ARL13BQ3SXY8 428 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 ZC3H12AQ5D1E8 599 aaKnown RBP16.03■□□□□ 0.16
DDB1-216ENST00000539739 OTUD1Q5VV17 481 aaPredicted RBP16.03■□□□□ 0.16
DDB1-216ENST00000539739 SCYL2Q6P3W7 929 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 TPCN2Q8NHX9 752 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 ATXN2LQ8WWM7 1075 aaKnown RBP16.03■□□□□ 0.16
DDB1-216ENST00000539739 ATRIPQ8WXE1 791 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 SLC39A13Q96H72 371 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 ADAM33Q9BZ11 813 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 SALL4Q9UJQ4 1053 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 ZNF510Q9Y2H8 683 aa16.03■□□□□ 0.16
DDB1-216ENST00000539739 E2F8A0AVK6 867 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 GOLGA6L9A6NEM1 432 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 IGLV3-27P01718 113 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 PCK1P35558 622 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 VIPR2P41587 438 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 SLC1A1P43005 524 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 SSR1P43307 286 aaKnown RBP16.02■□□□□ 0.16
DDB1-216ENST00000539739 KCNQ1P51787 676 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 HDAC4P56524 1084 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 ZXDBP98169 803 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 TANGO2Q6ICL3 276 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 CC2D1AQ6P1N0 951 aaPredicted RBP16.02■□□□□ 0.16
DDB1-216ENST00000539739 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 FAM131BQ86XD5 332 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 ATP6V0D2Q8N8Y2 350 aa16.02■□□□□ 0.16
DDB1-216ENST00000539739 BPIFB1Q8TDL5 484 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms