RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF670Q9BS34 389 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 FAM124BQ9H5Z6 455 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 IL1RAPL1Q9NZN1 696 aa9.99□□□□□ -0.81
CDH13-204ENST00000539548 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 BARX2Q9UMQ3 279 aaPredicted RBP9.99□□□□□ -0.81
CDH13-204ENST00000539548 MDM4O15151 490 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 B4GALT5O43286 388 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 LGR5O75473 907 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 ALDH1A2O94788 518 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 PFKMP08237 780 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 FGF3P11487 239 aaPredicted RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 SLC1A6P48664 564 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 INCA1Q0VD86 236 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 CDC16Q13042 620 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 CA9Q16790 459 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 EFHC1Q5JVL4 640 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 STEAP4Q687X5 459 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 JADE1Q6IE81 842 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 PGM2L1Q6PCE3 622 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 METTL7BQ6UX53 244 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 ZCCHC23Q6ZST2 131 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 MARK2Q7KZI7 788 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 CCNJLQ8IV13 435 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 MPP5Q8N3R9 675 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 TTC39CQ8N584 583 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 FAM172AQ8WUF8 416 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 PIWIL1Q96J94 861 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 WRNIP1Q96S55 665 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 SNRNP25Q9BV90 132 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 APOL6Q9BWW8 343 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 TRIM4Q9C037 500 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 FAM96AQ9H5X1 160 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 NRDE2Q9H7Z3 1164 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 HACL1Q9UJ83 578 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 ITGA11Q9UKX5 1188 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 EMCNQ9ULC0 261 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 DNAJC16Q9Y2G8 782 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 INO80B-WBP1J3KQ70 363 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 GPR25O00155 361 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 PIK3R2O00459 728 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 ITM2AO43736 263 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 GLRA3O75311 464 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 GRAP2O75791 330 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 PIM1P11309 404 aaPredicted RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 MYL4P12829 197 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 POLE2P56282 527 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 XIAPP98170 497 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 PDE1BQ01064 536 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 MBTD1Q05BQ5 628 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 SEMA5AQ13591 1074 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 PLPPR4Q7Z2D5 763 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 CDR2LQ86X02 465 aaPredicted RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 PDSS2Q86YH6 399 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 KHSRPQ92945 711 aaKnown RBP eCLIP9.98□□□□□ -0.81
CDH13-204ENST00000539548 AZIN2Q96A70 460 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 HPDLQ96IR7 371 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 TUBGCP5Q96RT8 1024 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 DDX50Q9BQ39 737 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 TRIM56Q9BRZ2 755 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 INO80BQ9C086 356 aaPredicted RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 NGRNQ9NPE2 291 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 CPSF2Q9P2I0 782 aaKnown RBP9.98□□□□□ -0.81
CDH13-204ENST00000539548 DCDC2Q9UHG0 476 aa9.98□□□□□ -0.81
CDH13-204ENST00000539548 SOWAHBA6NEL2 793 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ARHGAP42A6NI28 874 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 PLIN3O60664 434 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 USP1O94782 785 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SERPINE1P05121 402 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ZCCHC18P0CG32 403 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 STAG3L1P0CL83 205 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 MLNP12872 115 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 DPEP1P16444 411 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ZFXP17010 805 aaPredicted RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 CYP2F1P24903 491 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 GRK2P25098 689 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 RPS12P25398 132 aaKnown RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 SDC4P31431 198 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NR2C2P49116 596 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SLC25A3Q00325 362 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SLC6A3Q01959 620 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 BTKQ06187 659 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SLC10A2Q12908 348 aaPredicted RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 STILQ15468 1287 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 N4BP2L1Q5TBK1 243 aaPredicted RBP9.97□□□□□ -0.81
CDH13-204ENST00000539548 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ACAD11Q709F0 780 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 DHDDSQ86SQ9 333 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NCAPG2Q86XI2 1143 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SLC25A41Q8N5S1 370 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 GSTCDQ8NEC7 633 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 AFG1LQ8WV93 481 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 NCSTNQ92542 709 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 MMP19Q99542 508 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 VCX3BQ9H321 246 aa9.97□□□□□ -0.81
CDH13-204ENST00000539548 ASB7Q9H672 318 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms