RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 OR5B17Q8NGF7 314 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
YBX3-207ENST00000539204 KCNE4Q8WWG9 221 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 AK8Q96MA6 479 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 MED10Q9BTT4 135 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 DPH1Q9BZG8 443 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 FAM117AQ9C073 453 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 CIPCQ9C0C6 399 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 DPEP3Q9H4B8 488 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 PCIF1Q9H4Z3 704 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 MRPL44Q9H9J2 332 aaKnown RBP12.69□□□□□ -0.38
YBX3-207ENST00000539204 SGK2Q9HBY8 427 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 TLR8Q9NR97 1041 aaKnown RBP12.69□□□□□ -0.38
YBX3-207ENST00000539204 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
YBX3-207ENST00000539204 HEMK1Q9Y5R4 338 aaPredicted RBP12.69□□□□□ -0.38
YBX3-207ENST00000539204 ATP8B3O60423 1300 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 COL5A1P20908 1838 aaPredicted RBP12.68□□□□□ -0.38
YBX3-207ENST00000539204 PENKP01210 267 aaPredicted RBP12.68□□□□□ -0.38
YBX3-207ENST00000539204 KRT10P13645 584 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 PRKCHP24723 683 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 DDIT3P35638 169 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 CHKAP35790 457 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 ARRB1P49407 418 aaPredicted RBP12.68□□□□□ -0.38
YBX3-207ENST00000539204 PGFP49763 221 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 E2F1Q01094 437 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 ZBTB16Q05516 673 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 EIF4HQ15056 248 aaKnown RBP12.68□□□□□ -0.38
YBX3-207ENST00000539204 SURF1Q15526 300 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 ARL6IP4Q66PJ3 421 aaKnown RBP12.68□□□□□ -0.38
YBX3-207ENST00000539204 KDM7AQ6ZMT4 941 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 ANKS1BQ7Z6G8 1248 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 RAD54LQ92698 747 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 PIWIL1Q96J94 861 aaKnown RBP12.68□□□□□ -0.38
YBX3-207ENST00000539204 HIC2Q96JB3 615 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 ORAI3Q9BRQ5 295 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 STRA6Q9BX79 667 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 FBXO44Q9H4M3 255 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 DMAP1Q9NPF5 467 aaPredicted RBP12.68□□□□□ -0.38
YBX3-207ENST00000539204 ADAMTS1Q9UHI8 967 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 ZNF510Q9Y2H8 683 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 NUMA1Q14980 2115 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 MYLKQ15746 1914 aa12.68□□□□□ -0.38
YBX3-207ENST00000539204 TEX15Q9BXT5 2789 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 PPP1R37O75864 691 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 MT-CO3P00414 261 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 CST3P01034 146 aaPredicted RBP12.67□□□□□ -0.38
YBX3-207ENST00000539204 DNTTP04053 509 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 TNNC1P63316 161 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 HMGN5P82970 282 aaKnown RBP12.67□□□□□ -0.38
YBX3-207ENST00000539204 INSM1Q01101 510 aaPredicted RBP12.67□□□□□ -0.38
YBX3-207ENST00000539204 CAMK2GQ13555 558 aaPredicted RBP12.67□□□□□ -0.38
YBX3-207ENST00000539204 SHBQ15464 509 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 WDR72Q3MJ13 1102 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 L1TD1Q5T7N2 865 aaKnown RBP12.67□□□□□ -0.38
YBX3-207ENST00000539204 FYB2Q5VWT5 728 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 SFR1Q86XK3 245 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 RASSF8Q8NHQ8 419 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 SORCS1Q8WY21 1168 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 LARP4BQ92615 738 aaKnown RBP12.67□□□□□ -0.38
YBX3-207ENST00000539204 CYLDQ9NQC7 956 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 GDF3Q9NR23 364 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 PLA2G4CQ9UP65 541 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
YBX3-207ENST00000539204 A0A1W2PPC4 97 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 C7P10643 843 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 CD38P28907 300 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 ERVPABLB-1P60509 514 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 GRIN1Q05586 938 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 BNIP3Q12983 259 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 KIAA0895LQ68EN5 471 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 Q6ZNB5 142 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 DYMQ7RTS9 669 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 P2RY11Q96G91 374 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 SLC6A18Q96N87 628 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 TRIM4Q9C037 500 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 TBC1D7Q9P0N9 293 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 SEL1LQ9UBV2 794 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 NCKAP1Q9Y2A7 1128 aa12.66□□□□□ -0.38
YBX3-207ENST00000539204 FAM47DPA6NHR8 397 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 AP1G2O75843 785 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 GCNT3O95395 438 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 WNT1P04628 370 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 CYBBP04839 570 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 MPOP05164 745 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 IGHV4-34P06331 123 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 ACP1P24666 158 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
YBX3-207ENST00000539204 RPS14P62263 151 aaKnown RBP12.65□□□□□ -0.38
YBX3-207ENST00000539204 NFATC3Q12968 1075 aa12.65□□□□□ -0.38
YBX3-207ENST00000539204 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms