RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	TMEM63C	Q9P1W3	806 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TLR6	Q9Y2C9	796 aa		12.84	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TBC1D3B	A6NDS4	549 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SMTNL1	A8MU46	457 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	LGALS16	A8MUM7	142 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	NEDD8-MDP1	E9PL57	170 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	PES1	O00541	588 aa	Known RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	PAPSS1	O43252	624 aa	Predicted RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TIMM44	O43615	452 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	FOXD2	O60548	495 aa	Predicted RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	LSM8	O95777	96 aa	Known RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CAVIN2	O95810	425 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	USP8	P40818	1118 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	GABRB2	P47870	512 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SLC11A2	P49281	568 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	DGKG	P49619	791 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	YWHAZ	P63104	245 aa	Known RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	EFHC1	Q5JVL4	640 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ARC	Q7LC44	396 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	DENND1C	Q8IV53	801 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	WDTC1	Q8N5D0	677 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TMEM35B	Q8NCS4	154 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	GAB3	Q8WWW8	586 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	NDRG1	Q92597	394 aa	Known RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	EDEM1	Q92611	657 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SLC39A13	Q96H72	371 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ZC3H10	Q96K80	434 aa	Known RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	PPP1R13B	Q96KQ4	1090 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	GAN	Q9H2C0	597 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	DNAJC17	Q9NVM6	304 aa	Known RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TAB2	Q9NYJ8	693 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	RRN3	Q9NYV6	651 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	RAB23	Q9ULC3	237 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SMG5	Q9UPR3	1016 aa	Known RBP	12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	FHOD1	Q9Y613	1164 aa		12.83	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CFAP54	Q96N23	3096 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	FRYL	O94915	3013 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828		E5RJQ4	531 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828		F8VZ95	297 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SCAMP3	O14828	347 aa	Known RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	AXIN1	O15169	862 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	HR	O43593	1189 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	HSF2BP	O75031	334 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ALDH1A2	O94788	518 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	IGLV3-25	P01717	112 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	RET	P07949	1114 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SLC2A3	P11169	496 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	NCAM1	P13591	858 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CYP11B1	P15538	503 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	FNTB	P49356	437 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	COPB1	P53618	953 aa	Known RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TBX4	P57082	545 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	APBA1	Q02410	837 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ENPP2	Q13822	863 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	RAPGEF1	Q13905	1077 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TPGS1	Q6ZTW0	290 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TOGARAM2	Q6ZUX3	1019 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SLC26A9	Q7LBE3	791 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SLC47A2	Q86VL8	602 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	MSANTD4	Q8NCY6	345 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	DQX1	Q8TE96	717 aa	Known RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	IPO4	Q8TEX9	1081 aa	Known RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	DDX1	Q92499	740 aa	Known RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	FAM149B1	Q96BN6	582 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SLC2A13	Q96QE2	648 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	LSM14B	Q9BX40	385 aa	Known RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	VPS16	Q9H269	839 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	POLM	Q9NP87	494 aa	Predicted RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	C2orf42	Q9NWW7	574 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SFMBT1	Q9UHJ3	866 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CYTH4	Q9UIA0	394 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	AJAP1	Q9UKB5	411 aa	Predicted RBP	12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SIK3	Q9Y2K2	1263 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SPTBN4	Q9H254	2564 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	DMD	P11532	3685 aa		12.82	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CAPN9	O14815	690 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ACSL4	O60488	711 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	C7	P10643	843 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CDK11B	P21127	795 aa	Known RBP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	NTSR1	P30989	418 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	JAM2	P57087	298 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	MESP2	Q0VG99	397 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	BYSL	Q13895	437 aa	Known RBP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	SIM2	Q14190	667 aa	Predicted RBP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	C2orf27A	Q580R0	203 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	HSP90AA4P	Q58FG1	418 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	APTX	Q7Z2E3	356 aa	Known RBP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	ZNF513	Q8N8E2	541 aa	Predicted RBP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	NAT16	Q8N8M0	369 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TSTD1	Q8NFU3	115 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	WFIKKN2	Q8TEU8	576 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CLEC4C	Q8WTT0	213 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	UCMA	Q8WVF2	138 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	TMA16	Q96EY4	203 aa	Known RBP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	PIWIL1	Q96J94	861 aa	Known RBP	12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	CPXM1	Q96SM3	734 aa		12.81	□□□□□ -0.36
CLTCL1-205	ENST00000538828	GABRG3	Q99928	467 aa		12.81	□□□□□ -0.36

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