RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 E5RJQ4 531 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 RPP40O75818 363 aaKnown RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 IGLV3-27P01718 113 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 HARS2P49590 506 aaKnown RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 DGKEP52429 567 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 PTK2Q05397 1052 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 PDCLQ13371 301 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 DRAP1Q14919 205 aaPredicted RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 KRT31Q15323 416 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 EOGTQ5NDL2 527 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 NUDT18Q6ZVK8 323 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 SLC47A2Q86VL8 602 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 PASD1Q8IV76 773 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 KIAA2013Q8IYS2 634 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 FAM71AQ8IYT1 594 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 FAM160A2Q8N612 972 aaPredicted RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 ZNF513Q8N8E2 541 aaPredicted RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 KCNV2Q8TDN2 545 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 FAM149B1Q96BN6 582 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 LSM14BQ9BX40 385 aaKnown RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 NAA15Q9BXJ9 866 aaKnown RBP15.43■□□□□ 0.06
USP28-204ENST00000537642 VPS16Q9H269 839 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 FANCLQ9NW38 375 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 TMEM63CQ9P1W3 806 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 STOML2Q9UJZ1 356 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 GMEB2Q9UKD1 530 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 NAALADL1Q9UQQ1 740 aa15.43■□□□□ 0.06
USP28-204ENST00000537642 GFRA2O00451 464 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 LATS1O95835 1130 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 NCAM1P13591 858 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 TGM1P22735 817 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 RAPGEF1Q13905 1077 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 EGFLAMQ63HQ2 1017 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 ANO7Q6IWH7 933 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 KBTBD6Q86V97 674 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 RASSF3Q86WH2 238 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 ABCA7Q8IZY2 2146 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 DQX1Q8TE96 717 aaKnown RBP15.42■□□□□ 0.06
USP28-204ENST00000537642 PIWIL1Q96J94 861 aaKnown RBP15.42■□□□□ 0.06
USP28-204ENST00000537642 CPXM1Q96SM3 734 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 LHX5Q9H2C1 402 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 CLEC4EQ9ULY5 219 aa15.42■□□□□ 0.06
USP28-204ENST00000537642 SPTBN4Q9H254 2564 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 TSPAN3O60637 253 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 CYBBP04839 570 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 RETP07949 1114 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 UCHL3P15374 230 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 TBX4P57082 545 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 RING1Q06587 406 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 ADGRF1Q5T601 910 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 SYPL2Q5VXT5 272 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 BEND5Q7L4P6 421 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 CACNA2D4Q7Z3S7 1137 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 TRMT11Q7Z4G4 463 aaKnown RBP15.41■□□□□ 0.06
USP28-204ENST00000537642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.41■□□□□ 0.06
USP28-204ENST00000537642 C1orf131Q8NDD1 294 aaKnown RBP15.41■□□□□ 0.06
USP28-204ENST00000537642 MDGA1Q8NFP4 955 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 DDI1Q8WTU0 396 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 PPP1R13BQ96KQ4 1090 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 FCRL2Q96LA5 508 aaPredicted RBP15.41■□□□□ 0.06
USP28-204ENST00000537642 ACOX2Q99424 681 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 TPSD1Q9BZJ3 242 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 GANQ9H2C0 597 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 PARD6AQ9NPB6 346 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 SLC27A6Q9Y2P4 619 aa15.41■□□□□ 0.06
USP28-204ENST00000537642 DMXL1Q9Y485 3027 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 DCLK1O15075 740 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 HOXD9P28356 352 aaPredicted RBP15.4■□□□□ 0.06
USP28-204ENST00000537642 NTSR1P30989 418 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 KRT9P35527 623 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 WASP42768 502 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 KLK7P49862 253 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 BPIFB4P59827 614 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 MYL5Q02045 173 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 TYRO3Q06418 890 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 NCAPHQ15003 741 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 TAF5Q15542 800 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 GEN1Q17RS7 908 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 MPPE1Q53F39 396 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 FAM133BQ5BKY9 247 aaKnown RBP15.4■□□□□ 0.06
USP28-204ENST00000537642 NUGGCQ68CJ6 796 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 TAC4Q86UU9 113 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 UNC45BQ8IWX7 931 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 ADAM32Q8TC27 787 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 SLC39A13Q96H72 371 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 HSD3B7Q9H2F3 369 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 POPDC2Q9HBU9 364 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 POLMQ9NP87 494 aaPredicted RBP15.4■□□□□ 0.06
USP28-204ENST00000537642 PLCB1Q9NQ66 1216 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 TLR6Q9Y2C9 796 aa15.4■□□□□ 0.06
USP28-204ENST00000537642 CEP250Q9BV73 2442 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 THADAQ6YHU6 1953 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 GOLGA6L7A0A1B0GV03 622 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 TCRBV21S2A2A0A5A6 115 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 CAPN9O14815 690 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 ACSL4O60488 711 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 ALDH1A2O94788 518 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 ERBB2P04626 1255 aa15.39■□□□□ 0.05
USP28-204ENST00000537642 CYP11B1P15538 503 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms