RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 NOTCH4Q99466 2003 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 TUBB4AP04350 444 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 ATP5C1P36542 298 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 KCNQ1P51787 676 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 ZXDBP98169 803 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 ADAM15Q13444 863 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 HADHQ16836 314 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 PABPC1LQ4VXU2 614 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 ZFYVE27Q5T4F4 411 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 LRRC38Q5VT99 294 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 ANKRD54Q6NXT1 300 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 TMEM184AQ6ZMB5 413 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 UBL4BQ8N7F7 174 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 ITFG1Q8TB96 612 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 CAPZA3Q96KX2 299 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 FCRL2Q96LA5 508 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 NACA2Q9H009 215 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 LMCD1Q9NZU5 365 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 DPP7Q9UHL4 492 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.2
SFSWAP-206ENST00000537582 ANAPC1Q9H1A4 1944 aa16.27■□□□□ 0.19
SFSWAP-206ENST00000537582 C3orf70A6NLC5 250 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 SCAMP3O14828 347 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 MOCS2O96007 188 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 DESP17661 470 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 CEBPBP17676 345 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 CDC25CP30307 473 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 PPP3CCP48454 512 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 RWDD2BP57060 319 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 TBX4P57082 545 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 ELMSAN1Q6PJG2 1045 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 KATNAL2Q8IYT4 538 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 MRPS31Q92665 395 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 RNF34Q969K3 372 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 SLC39A13Q96H72 371 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 ZFRQ96KR1 1074 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 SERPINB11Q96P15 392 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 SLC46A2Q9BY10 475 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 TKTL2Q9H0I9 626 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 DZANK1Q9NVP4 752 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 FZD10Q9ULW2 581 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 XIRP2A4UGR9 3374 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 LRRD1A4D1F6 860 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 PAPLNO95428 1278 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 OLFM2O95897 454 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 F9P00740 461 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 KRT7P08729 469 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 POU2F2P09086 479 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 IRF1P10914 325 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 GBP1P32455 592 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 ADRA1BP35368 520 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 TUBP50607 506 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 ARSEP51690 589 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 MMRN1Q13201 1228 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 TRIP4Q15650 581 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 GPR158Q5T848 1215 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 MFSD7Q6UXD7 560 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 POLNQ7Z5Q5 900 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 ZNF276Q8N554 614 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 CMASQ8NFW8 434 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 MYLIPQ8WY64 445 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 ZSWIM3Q96MP5 696 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 GCNAQ96QF7 691 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 KCTD15Q96SI1 283 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 DHX35Q9H5Z1 703 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 WDCPQ9H6R7 721 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 CLDND1Q9NY35 253 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 AP4E1Q9UPM8 1137 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 TLR6Q9Y2C9 796 aa16.26■□□□□ 0.19
SFSWAP-206ENST00000537582 C2orf16Q68DN1 1984 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 KCNU1A8MYU2 1149 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 FAM72CH0Y354 149 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 PDE2AO00408 941 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 CEP104O60308 925 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 IGLV3-27P01718 113 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 MBL2P11226 248 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 HDCP19113 662 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 POU3F3P20264 500 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 LTBRP36941 435 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 CBX2Q14781 532 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 CLUL1Q15846 466 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 CTC1Q2NKJ3 1217 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 ERMARDQ5T6L9 678 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 FAM72AQ5TYM5 149 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 FAM72DQ6L9T8 149 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 KLHDC10Q6PID8 442 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 SND1Q7KZF4 910 aaKnown RBP eCLIP16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 FAM72BQ86X60 149 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 ADAMTS19Q8TE59 1207 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 KLF16Q9BXK1 252 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 PCDH18Q9HCL0 1135 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 ARHGEF38Q9NXL2 777 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 CPQQ9Y646 472 aa16.25■□□□□ 0.19
SFSWAP-206ENST00000537582 TCRBV7S2A1N4TA0A589 114 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms