RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 ANKS1BQ7Z6G8 1248 aa23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 MMGT1Q8N4V1 131 aa23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 NOA1Q8NC60 698 aaKnown RBP23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 GDPD5Q8WTR4 605 aa23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 TIFAQ96CG3 184 aa23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 NACA2Q9H009 215 aa23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 CCSER2Q9H7U1 834 aa23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 RASAL2Q9UJF2 1139 aa23.79■■□□□ 1.4
RBFOX1-206ENST00000535565 DENND4CQ5VZ89 1909 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 TCRBV7S2A1N4TA0A589 114 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 ATP5C1P36542 298 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 ARL4AP40617 200 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 KPNA1P52294 538 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 SMAD3P84022 425 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 RFX6Q8HWS3 928 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 HERPUD2Q9BSE4 406 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 HOMER3Q9NSC5 361 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 ARHGEF38Q9NXL2 777 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 RCOR3Q9P2K3 495 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 DNMT3LQ9UJW3 386 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 CTIFO43310 598 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 ZMYND10O75800 440 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 HOXA9P31269 272 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 TBX4P57082 545 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 TFDP2Q14188 446 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 TRIP4Q15650 581 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 KLHDC10Q6PID8 442 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 MIB1Q86YT6 1006 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 SLC22A17Q8WUG5 538 aa23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 KCTD15Q96SI1 283 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 V9GYY5 206 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-206ENST00000535565 PHF2O75151 1096 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 TBX18O95935 607 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 EPCAMP16422 314 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 RGS19P49795 217 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 MMRN1Q13201 1228 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 SIX1Q15475 284 aaPredicted RBP23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 KLHL7Q8IXQ5 586 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 RNF157Q96PX1 679 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 KRT12Q99456 494 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 TLE6Q9H808 572 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 ZNF334Q9HCZ1 680 aaPredicted RBP23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 ASAH2Q9NR71 780 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 MTMR10Q9NXD2 777 aa23.77■■□□□ 1.4
RBFOX1-206ENST00000535565 CHD9Q3L8U1 2897 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 UQCRHLA0A096LP55 91 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 SPDYE4A6NLX3 237 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 H3BRJ5 948 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 PER2O15055 1255 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 CCL16O15467 120 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 CST8O60676 142 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 APOEP02649 317 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 F11P03951 625 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 UQCRHP07919 91 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 HNRNPA1P09651 372 aaKnown RBP eCLIP23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 ZNF135P52742 658 aaPredicted RBP23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 ANKRD20A8PQ5CZ79 823 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 C8orf74Q6P047 294 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 BBS12Q6ZW61 710 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 RBM23Q86U06 439 aaKnown RBP23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 PYROXD2Q8N2H3 581 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 PRELID2Q8N945 189 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 TSC1Q92574 1164 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 SLC39A13Q96H72 371 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 GCNAQ96QF7 691 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 HAPLN3Q96S86 360 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 DDX47Q9H0S4 455 aaKnown RBP23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 SLITRK6Q9H5Y7 841 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 TMPRSS4Q9NRS4 437 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 SLC12A6Q9UHW9 1150 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 HBS1LQ9Y450 684 aaKnown RBP23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 NR2E1Q9Y466 385 aa23.76■■□□□ 1.39
RBFOX1-206ENST00000535565 SLC12A8A0AV02 714 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 XYLBO75191 536 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 GABRR2P28476 465 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 CDC25CP30307 473 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 CHRNA3P32297 505 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 RING1Q06587 406 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 MTA1Q13330 715 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 CYP1B1Q16678 543 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 ERCC6LQ2NKX8 1250 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 CHRDL2Q6WN34 429 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 ADGRD2Q7Z7M1 963 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 C12orf50Q8NA57 414 aaPredicted RBP23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 TTC13Q8NBP0 860 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 PPP2R3CQ969Q6 453 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 MAGOHBQ96A72 148 aaKnown RBP23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 FAF2Q96CS3 445 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 RUNDC3BQ96NL0 473 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 ANLNQ9NQW6 1124 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 HCFC2Q9Y5Z7 792 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 MYO7AQ13402 2215 aa23.75■■□□□ 1.39
RBFOX1-206ENST00000535565 EPOPA6NHQ4 379 aa23.74■■□□□ 1.39
RBFOX1-206ENST00000535565 COCHO43405 550 aa23.74■■□□□ 1.39
RBFOX1-206ENST00000535565 FGF19O95750 216 aa23.74■■□□□ 1.39
RBFOX1-206ENST00000535565 IL4RP24394 825 aa23.74■■□□□ 1.39
RBFOX1-206ENST00000535565 DYNLT1P63172 113 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms