RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SYTL1Q8IYJ3 562 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 AGGF1Q8N302 714 aaeCLIP12.96□□□□□ -0.33
SPG11-203ENST00000535302 RNF148Q8N7C7 305 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 OMA1Q96E52 524 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 AHCYL2Q96HN2 611 aaKnown RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 FRMD6Q96NE9 622 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 BTBD9Q96Q07 612 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 TMCC3Q9ULS5 477 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 DNAJC16Q9Y2G8 782 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 CDY1Q9Y6F8 540 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 INSRRP14616 1297 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 CYP2F1P24903 491 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.34
SPG11-203ENST00000535302 GRIK4Q16099 956 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 TMC7Q7Z402 723 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 GPR141Q7Z602 305 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 ZSCAN18Q8TBC5 510 aaPredicted RBP12.96□□□□□ -0.34
SPG11-203ENST00000535302 ZBTB10Q96DT7 871 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 MIEF1Q9NQG6 463 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 AAASQ9NRG9 546 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 FAM153AQ9UHL3 310 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.34
SPG11-203ENST00000535302 ADIGQ0VDE8 80 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 AGAP9Q5VTM2 703 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 DAB2IPQ5VWQ8 1189 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 DAGLBQ8NCG7 672 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 CYLDQ9NQC7 956 aa12.96□□□□□ -0.34
SPG11-203ENST00000535302 PSMD11O00231 422 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DNALI1O14645 258 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 SLC2A4P14672 509 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 LBPP18428 481 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 SREBF1P36956 1147 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 ST13P50502 369 aaKnown RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 CXCL9Q07325 125 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 MAPK7Q13164 816 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 ZNF618Q5T7W0 954 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 PCNX4Q63HM2 1172 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 ENGASEQ8NFI3 743 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 GTF3C2Q8WUA4 911 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 ZBTB45Q96K62 511 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 PURBQ96QR8 312 aaKnown RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 ERGIC2Q96RQ1 377 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 AVENQ9NQS1 362 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 GTF3C4Q9UKN8 822 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 UNC13BO14795 1591 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 A0A1B0GW55 424 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 TK2O00142 265 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 FAM20BO75063 409 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DUX4L2P0CJ85 424 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DUX4L3P0CJ86 424 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DUX4L4P0CJ87 422 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DUX4L5P0CJ88 424 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DUX4L6P0CJ89 424 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DUX4L7P0CJ90 424 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 GPR1P46091 355 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 COPAP53621 1224 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 CRYMQ14894 314 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 BOLA3Q53S33 107 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 LRRN4Q8WUT4 740 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 ZNF624Q9P2J8 865 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 DUX4Q9UBX2 424 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 SIK3Q9Y2K2 1263 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 CCNG1P51959 295 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 KPNA1P52294 538 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 DSG1Q02413 1049 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 EPS8Q12929 822 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 MMRN1Q13201 1228 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 DGKZQ13574 1117 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 ZFPM1Q8IX07 1006 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 ZDHHC15Q96MV8 337 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 SLC40A1Q9NP59 571 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.95□□□□□ -0.34
SPG11-203ENST00000535302 DYRK1BQ9Y463 629 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 MTFR1Q15390 333 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 FGD3Q5JSP0 725 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 TMC5Q6UXY8 1006 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 SETD3Q86TU7 594 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 COL26A1Q96A83 441 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 PAFAH2Q99487 392 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 KLHL31Q9H511 634 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 WDR27A2RRH5 827 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 NDST1P52848 882 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 KCNMA1Q12791 1236 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 TMEM132BQ14DG7 1078 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 NCF4Q15080 339 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 CYP4X1Q8N118 509 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 ILKAPQ9H0C8 392 aaPredicted RBP12.95□□□□□ -0.34
SPG11-203ENST00000535302 ABCG8Q9H221 673 aa12.95□□□□□ -0.34
SPG11-203ENST00000535302 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms