RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 RASSF3Q86WH2 238 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 MLKLQ8NB16 471 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 CLEC4CQ8WTT0 213 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 SLC35F5Q8WV83 523 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ZC3H10Q96K80 434 aaKnown RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 SPACA7Q96KW9 195 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 MED15Q96RN5 788 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ABCC13Q9NSE7 274 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 CACNA2D2Q9NY47 1150 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 DLL3Q9NYJ7 618 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 HBS1LQ9Y450 684 aaKnown RBP10.91□□□□□ -0.66
CAPN1-225ENST00000533704 RAD54BQ9Y620 910 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 ADAMTS9Q9P2N4 1935 aa10.91□□□□□ -0.66
CAPN1-225ENST00000533704 PES1O00541 588 aaKnown RBP10.9□□□□□ -0.66
CAPN1-225ENST00000533704 GABBR2O75899 941 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 LTFP02788 710 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 CISD3P0C7P0 127 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-225ENST00000533704 SLC9A1P19634 815 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 GNA15P30679 374 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 MFAP3P55082 362 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 TRIP4Q15650 581 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-225ENST00000533704 DPCR1Q3MIW9 517 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 FYB2Q5VWT5 728 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 TCEAL6Q6IPX3 200 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 TRIM65Q6PJ69 517 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 C11orf74Q86VG3 221 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 NETO1Q8TDF5 533 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 TCEAL3Q969E4 200 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 FAM149B1Q96BN6 582 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 P2RY11Q96G91 374 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 ACP6Q9NPH0 428 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 HCN2Q9UL51 889 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 PCDHGA5Q9Y5G8 931 aa10.9□□□□□ -0.66
CAPN1-225ENST00000533704 NCOR2Q9Y618 2525 aa10.9□□□□□ -0.67
CAPN1-225ENST00000533704 CKAP5Q14008 2032 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 MED19A0JLT2 244 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-225ENST00000533704 MED7O43513 233 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 FOXD2O60548 495 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-225ENST00000533704 FBXO21O94952 628 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 CAVIN2O95810 425 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 PENKP01210 267 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-225ENST00000533704 ZNF806P0C7X5 589 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 NCAM1P13591 858 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 PRKCSHP14314 528 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-225ENST00000533704 GABRG2P18507 467 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 FOXK2Q01167 660 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 EXOC3L4Q17RC7 722 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 GEN1Q17RS7 908 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 PMS2CLQ68D20 193 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 KIAA1211LQ6NV74 962 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 KIAA1324Q6UXG2 1013 aaKnown RBP10.89□□□□□ -0.67
CAPN1-225ENST00000533704 ENOSF1Q7L5Y1 443 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 CYP2U1Q7Z449 544 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 ANKS1BQ7Z6G8 1248 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 IRF2BP1Q8IU81 584 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 FAM114A1Q8IWE2 563 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 SCUBE3Q8IX30 993 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 TMEFF1Q8IYR6 380 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 CPXM2Q8N436 756 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 DEFB119Q8N690 84 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 FRMD1Q8N878 549 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 IPO4Q8TEX9 1081 aaKnown RBP10.89□□□□□ -0.67
CAPN1-225ENST00000533704 UCMAQ8WVF2 138 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 IRGQQ8WZA9 623 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 PIGKQ92643 395 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 HSFY1Q96LI6 401 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 RTKNQ9BST9 563 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 CIPCQ9C0C6 399 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 SLC6A17Q9H1V8 727 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 VPS45Q9NRW7 570 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 CALCOCO1Q9P1Z2 691 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 APEX2Q9UBZ4 518 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 DACH1Q9UI36 760 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 CLEC4EQ9ULY5 219 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 STARD13Q9Y3M8 1113 aa10.89□□□□□ -0.67
CAPN1-225ENST00000533704 A0A1W2PQF6 199 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 BCLAF3A2AJT9 711 aaKnown RBP10.88□□□□□ -0.67
CAPN1-225ENST00000533704 WASH3PC4AMC7 463 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 SLC30A4O14863 429 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 PON1P27169 355 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 P2RY2P41231 377 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 GPD2P43304 727 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 TBX4P57082 545 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 ARID5AQ03989 594 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 BYSLQ13895 437 aaKnown RBP10.88□□□□□ -0.67
CAPN1-225ENST00000533704 STARD3Q14849 445 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 MAN2A1Q16706 1144 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 MPPE1Q53F39 396 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 IL31Q6EBC2 164 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 MSANTD2Q6P1R3 559 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 LPCAT2Q7L5N7 544 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 PASD1Q8IV76 773 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 SCML4Q8N228 414 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 OLIG1Q8TAK6 271 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 ADAM32Q8TC27 787 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 ZNF606Q8WXB4 792 aa10.88□□□□□ -0.67
CAPN1-225ENST00000533704 SORCS1Q8WY21 1168 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms