RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TUBGCP2Q9BSJ2 902 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 ARRDC1-AS1Q9H2J1 176 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 NDST4Q9H3R1 872 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 INVSQ9Y283 1065 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 ABCA7Q8IZY2 2146 aa17.99■□□□□ 0.47
PHRF1-204ENST00000532550 PRRT4C9JH25 899 aa17.98■□□□□ 0.47
PHRF1-204ENST00000532550 PES1O00541 588 aaKnown RBP17.98■□□□□ 0.47
PHRF1-204ENST00000532550 ZBTB24O43167 697 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-204ENST00000532550 SART1O43290 800 aaKnown RBP17.98■□□□□ 0.47
PHRF1-204ENST00000532550 FOXD2O60548 495 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-204ENST00000532550 CHRM1P11229 460 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-204ENST00000532550 HNRNPLP14866 589 aaKnown RBP eCLIP17.98■□□□□ 0.47
PHRF1-204ENST00000532550 WASP42768 502 aa17.98■□□□□ 0.47
PHRF1-204ENST00000532550 APBA1Q02410 837 aa17.98■□□□□ 0.47
PHRF1-204ENST00000532550 PUM1Q14671 1186 aaKnown RBP eCLIP17.98■□□□□ 0.471e-9■■■□□ 15.6
PHRF1-204ENST00000532550 MEA1Q16626 185 aa17.98■□□□□ 0.47
PHRF1-204ENST00000532550 MPPE1Q53F39 396 aa17.98■□□□□ 0.47
PHRF1-204ENST00000532550 DUSP15Q9H1R2 295 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-204ENST00000532550 DNAJC12Q9UKB3 198 aa17.98■□□□□ 0.47
PHRF1-204ENST00000532550 SLC27A6Q9Y2P4 619 aa17.98■□□□□ 0.47
PHRF1-204ENST00000532550 TCRBV21S2A2A0A5A6 115 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 MSI1O43347 362 aaKnown RBP17.97■□□□□ 0.47
PHRF1-204ENST00000532550 EPN2O95208 641 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 LATS1O95835 1130 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 NCAM1P13591 858 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 HOXB2P14652 356 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 RPL34P49207 117 aaKnown RBP17.97■□□□□ 0.47
PHRF1-204ENST00000532550 PTK2Q05397 1052 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 BYSLQ13895 437 aaKnown RBP17.97■□□□□ 0.47
PHRF1-204ENST00000532550 ADGRF1Q5T601 910 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 EGFLAMQ63HQ2 1017 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 SMYD5Q6GMV2 418 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 MSANTD2Q6P1R3 559 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 UNC45BQ8IWX7 931 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 FAM217AQ8IXS0 508 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 HMGB4Q8WW32 186 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 SHC3Q92529 594 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 FAM149B1Q96BN6 582 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 TMA16Q96EY4 203 aaKnown RBP17.97■□□□□ 0.47
PHRF1-204ENST00000532550 SLC4A5Q9BY07 1137 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 SLC2A11Q9BYW1 496 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 ACP6Q9NPH0 428 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 HCN2Q9UL51 889 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 PCDHGA5Q9Y5G8 931 aa17.97■□□□□ 0.47
PHRF1-204ENST00000532550 BECN2A8MW95 431 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 KCNJ18B7U540 433 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 CAPN9O14815 690 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 MAP3K13O43283 966 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 TSPAN3O60637 253 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 TBX4P57082 545 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 ZNF445P59923 1031 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 KCNJ12Q14500 433 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 NUGGCQ68CJ6 796 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 PRR23CQ6ZRP0 262 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 TMEM110Q86TL2 294 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 UCMAQ8WVF2 138 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 P2RY11Q96G91 374 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 ACOX2Q99424 681 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 TRIM62Q9BVG3 475 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 SAMSN1Q9NSI8 373 aaKnown RBP17.96■□□□□ 0.47
PHRF1-204ENST00000532550 STOML2Q9UJZ1 356 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.96■□□□□ 0.47
PHRF1-204ENST00000532550 THADAQ6YHU6 1953 aa17.96■□□□□ 0.47
PHRF1-204ENST00000532550 FOXN3O00409 490 aaPredicted RBP17.95■□□□□ 0.46
PHRF1-204ENST00000532550 ZNF806P0C7X5 589 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 EEF1GP26641 437 aaKnown RBP17.95■□□□□ 0.46
PHRF1-204ENST00000532550 SLC11A2P49281 568 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 E2F5Q15329 346 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 MIIPQ5JXC2 388 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 ERMP1Q7Z2K6 904 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 OLIG1Q8TAK6 271 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 GPT2Q8TD30 523 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 PIWIL1Q96J94 861 aaKnown RBP17.95■□□□□ 0.46
PHRF1-204ENST00000532550 SPACA7Q96KW9 195 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 SIX2Q9NPC8 291 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 DLL3Q9NYJ7 618 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 CYTH4Q9UIA0 394 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 CDV3Q9UKY7 258 aaKnown RBP17.95■□□□□ 0.46
PHRF1-204ENST00000532550 NAALADL1Q9UQQ1 740 aa17.95■□□□□ 0.46
PHRF1-204ENST00000532550 DMXL1Q9Y485 3027 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 E5RJQ4 531 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 GFRA2O00451 464 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 TIMM44O43615 452 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 FYNP06241 537 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 KRT9P35527 623 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 SNX16P57768 344 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 BPIFB4P59827 614 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 YWHAZP63104 245 aaKnown RBP17.94■□□□□ 0.46
PHRF1-204ENST00000532550 FOXK2Q01167 660 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 CREB5Q02930 508 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 RING1Q06587 406 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 CCDC6Q16204 474 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 GEN1Q17RS7 908 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 TCP11X2Q5H9J9 407 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 SASS6Q6UVJ0 657 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 BEND5Q7L4P6 421 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 DGLUCYQ7Z3D6 616 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 ANKS1BQ7Z6G8 1248 aa17.94■□□□□ 0.46
PHRF1-204ENST00000532550 C12orf50Q8NA57 414 aaPredicted RBP17.94■□□□□ 0.46
PHRF1-204ENST00000532550 ENOX1Q8TC92 643 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms