RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 CSPG4P5Q96PW8 444 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 PKMYT1Q99640 499 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 EPAS1Q99814 870 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 SMOQ99835 787 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 OSBPL2Q9H1P3 480 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 CCDC134Q9H6E4 229 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 SSU72Q9NP77 194 aaKnown RBP12.73□□□□□ -0.37
CHD7-211ENST00000532149 EIF2B3Q9NR50 452 aaKnown RBP12.73□□□□□ -0.37
CHD7-211ENST00000532149 NINJ2Q9NZG7 142 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 SLC12A6Q9UHW9 1150 aa12.73□□□□□ -0.37
CHD7-211ENST00000532149 MYBPHLA2RUH7 354 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
CHD7-211ENST00000532149 PSMD3O43242 534 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 POMCP01189 267 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 CD48P09326 243 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 CXCR3P49682 368 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 AUHQ13825 339 aaKnown RBP12.72□□□□□ -0.37
CHD7-211ENST00000532149 TAF5Q15542 800 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 TRIP13Q15645 432 aaPredicted RBP12.72□□□□□ -0.37
CHD7-211ENST00000532149 ZSCAN26Q16670 478 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 KYNUQ16719 465 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 PPP6R3Q5H9R7 873 aaPredicted RBP12.72□□□□□ -0.37
CHD7-211ENST00000532149 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 KCTD16Q68DU8 428 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 ZNF449Q6P9G9 518 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 TRAF7Q6Q0C0 670 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 ARHGEF18Q6ZSZ5 1173 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 VPS52Q8N1B4 723 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 PQLC3Q8N755 202 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 FAM71DQ8N9W8 422 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 RNF169Q8NCN4 708 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 CPT1BQ92523 772 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 MYLPFQ96A32 169 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 PIWIL1Q96J94 861 aaKnown RBP12.72□□□□□ -0.37
CHD7-211ENST00000532149 QKIQ96PU8 341 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHD7-211ENST00000532149 HAPLN3Q96S86 360 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 ULBP1Q9BZM6 244 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 SAYSD1Q9NPB0 183 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
CHD7-211ENST00000532149 EXOC1LA0A1B0GW35 172 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 TLDC2A0PJX2 215 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 HHLA1C9JL84 531 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 KCNN4O15554 427 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 ATP2C2O75185 946 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 TADA2AO75478 443 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 DGKIO75912 1065 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 ACSL3O95573 720 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 LSP1P33241 339 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 RFC2P35250 354 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 VPS41P49754 854 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 KPNA1P52294 538 aaPredicted RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 NRG1Q02297 640 aaPredicted RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 PPP2R5DQ14738 602 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 LLGL1Q15334 1064 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 SH3PXD2AQ5TCZ1 1133 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 MON1AQ86VX9 555 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 UNC45BQ8IWX7 931 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 ZNF276Q8N554 614 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 C3orf58Q8NDZ4 430 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 RNF139Q8WU17 664 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 PPP1R13LQ8WUF5 828 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 CDK5RAP1Q96SZ6 601 aaKnown RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 CYTH2Q99418 400 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 WDCPQ9H6R7 721 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 PAK6Q9NQU5 681 aaPredicted RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 OLA1Q9NTK5 396 aaKnown RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 MTMR10Q9NXD2 777 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 HSFX1Q9UBD0 423 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 TRHDEQ9UKU6 1024 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 OGDHLQ9ULD0 1010 aa12.71□□□□□ -0.37
CHD7-211ENST00000532149 ZMYND8Q9ULU4 1186 aaPredicted RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.37
CHD7-211ENST00000532149 ATXN2Q99700 1313 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 FRMPD3Q5JV73 1810 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 GMNCA6NCL1 334 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 MEIS3P2A8K0S8 358 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 EEF2KO00418 725 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 PIK3R2O00459 728 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 CLDN5O00501 218 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 EBAG9O00559 213 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 ENPP3O14638 875 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 FGF10O15520 208 aaPredicted RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 EFCAB14O75071 495 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 FAM107AO95990 144 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 NCAM1P13591 858 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 GBP2P32456 591 aaPredicted RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 STX2P32856 288 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 CHKAP35790 457 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 VEGFBP49765 207 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms