RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 RFC1P35251 1148 aaPredicted RBP23.19■■□□□ 1.3
LRRK1-208ENST00000532029 CYLC1P35663 651 aaPredicted RBP23.19■■□□□ 1.3
LRRK1-208ENST00000532029 MAMLD1Q13495 774 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 EML3Q32P44 896 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 SND1Q7KZF4 910 aaKnown RBP eCLIP23.19■■□□□ 1.3
LRRK1-208ENST00000532029 DENND1CQ8IV53 801 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 CCDC170Q8IYT3 715 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 CPA6Q8N4T0 437 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 CFAP57Q96MR6 1250 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 THAP2Q9H0W7 228 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 LINC00597Q9H2U6 94 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 TRPV5Q9NQA5 729 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 TMEM51Q9NW97 253 aa23.19■■□□□ 1.3
LRRK1-208ENST00000532029 ARNTLO00327 626 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 F9P00740 461 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 IGLV3-27P01718 113 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 KLKB1P03952 638 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 H2AFZP0C0S5 128 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 SLC2A3P11169 496 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 ARSAP15289 507 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 DESP17661 470 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 FECHP22830 423 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 GALCP54803 685 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 DEUP1Q05D60 604 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 TNK2Q07912 1038 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 NR1H3Q13133 447 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 RUNX3Q13761 415 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 ITPRIPL2Q3MIP1 535 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 PPP1R15BQ5SWA1 713 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 TRNP1Q6NT89 227 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 Q6ZNB5 142 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 H2AFVQ71UI9 128 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 CTNNBL1Q8WYA6 563 aaPredicted RBP23.18■■□□□ 1.3
LRRK1-208ENST00000532029 EDAQ92838 391 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 NT5C3BQ969T7 300 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 SLC39A13Q96H72 371 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 FCRL2Q96LA5 508 aaPredicted RBP23.18■■□□□ 1.3
LRRK1-208ENST00000532029 TBCBQ99426 244 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 BAG1Q99933 345 aaPredicted RBP23.18■■□□□ 1.3
LRRK1-208ENST00000532029 HPS4Q9NQG7 708 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 WNT16Q9UBV4 365 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 AGO1Q9UL18 857 aaKnown RBP23.18■■□□□ 1.3
LRRK1-208ENST00000532029 MYO10Q9HD67 2058 aa23.18■■□□□ 1.3
LRRK1-208ENST00000532029 LATS1O95835 1130 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 PTPN9P43378 593 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 SLC11A2P49281 568 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 RPL7AP62424 266 aaKnown RBP23.17■■□□□ 1.3
LRRK1-208ENST00000532029 ATP11AP98196 1134 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 ZC3H12AQ5D1E8 599 aaKnown RBP23.17■■□□□ 1.3
LRRK1-208ENST00000532029 TTC8Q8TAM2 541 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 PGAP3Q96FM1 320 aaPredicted RBP23.17■■□□□ 1.3
LRRK1-208ENST00000532029 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.17■■□□□ 1.3
LRRK1-208ENST00000532029 GTSE1Q9NYZ3 720 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 SLC12A6Q9UHW9 1150 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 CA14Q9ULX7 337 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 PAXBP1Q9Y5B6 917 aa23.17■■□□□ 1.3
LRRK1-208ENST00000532029 KIF26AQ9ULI4 1882 aaPredicted RBP23.17■■□□□ 1.3
LRRK1-208ENST00000532029 IPO7O95373 1038 aaKnown RBP23.16■■□□□ 1.3
LRRK1-208ENST00000532029 MOCS2O96007 188 aaPredicted RBP23.16■■□□□ 1.3
LRRK1-208ENST00000532029 CCR1P32246 355 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 RDXP35241 583 aaKnown RBP23.16■■□□□ 1.3
LRRK1-208ENST00000532029 SIGLEC14Q08ET2 396 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 SPA17Q15506 151 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 CDO1Q16878 200 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 CCDC14Q49A88 953 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 SLC44A4Q53GD3 710 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 C10orf76Q5T2E6 689 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 OTUD1Q5VV17 481 aaPredicted RBP23.16■■□□□ 1.3
LRRK1-208ENST00000532029 ADGRG2Q8IZP9 1017 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 ATP6V0D2Q8N8Y2 350 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 ECT2Q9H8V3 914 aa23.16■■□□□ 1.3
LRRK1-208ENST00000532029 SOWAHDA6NJG2 315 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 PI4K2BG5E9Z4 385 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 ADH1CP00326 375 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 CYP1A2P05177 515 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 TFE3P19532 575 aaPredicted RBP23.15■■□□□ 1.3
LRRK1-208ENST00000532029 CHKAP35790 457 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 ZNF143P52747 638 aaPredicted RBP23.15■■□□□ 1.3
LRRK1-208ENST00000532029 EIF4EBP2Q13542 120 aaPredicted RBP23.15■■□□□ 1.3
LRRK1-208ENST00000532029 PPP2R5DQ14738 602 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 DHCR24Q15392 516 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 C15orf59Q2T9L4 293 aaPredicted RBP23.15■■□□□ 1.3
LRRK1-208ENST00000532029 AZIN2Q96A70 460 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 DDX50Q9BQ39 737 aaKnown RBP23.15■■□□□ 1.3
LRRK1-208ENST00000532029 PACSIN1Q9BY11 444 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 C8orf33Q9H7E9 229 aaPredicted RBP23.15■■□□□ 1.3
LRRK1-208ENST00000532029 LUC7LQ9NQ29 371 aaKnown RBP23.15■■□□□ 1.3
LRRK1-208ENST00000532029 ARHGEF3Q9NR81 526 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 HEBP1Q9NRV9 189 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 PIGVQ9NUD9 493 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 PIAS3Q9Y6X2 628 aa23.15■■□□□ 1.3
LRRK1-208ENST00000532029 ACSL4O60488 711 aa23.14■■□□□ 1.29
LRRK1-208ENST00000532029 CYP17A1P05093 508 aa23.14■■□□□ 1.29
LRRK1-208ENST00000532029 TMEM253P0C7T8 217 aa23.14■■□□□ 1.29
LRRK1-208ENST00000532029 AMPD2Q01433 879 aa23.14■■□□□ 1.29
LRRK1-208ENST00000532029 MTA1Q13330 715 aa23.14■■□□□ 1.29
LRRK1-208ENST00000532029 MLF2Q15773 248 aaPredicted RBP23.14■■□□□ 1.29
LRRK1-208ENST00000532029 BRMS1LQ5PSV4 323 aa23.14■■□□□ 1.29
LRRK1-208ENST00000532029 STRADAQ7RTN6 431 aa23.14■■□□□ 1.29
LRRK1-208ENST00000532029 ARHGEF26Q96DR7 871 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms