RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ERLEC1Q96DZ1 483 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 PIWIL1Q96J94 861 aaKnown RBP17.61■□□□□ 0.41
CPSF1-207ENST00000531727 MRGPRX1Q96LB2 322 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 CEP63Q96MT8 703 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 IPO9Q96P70 1041 aaKnown RBP17.61■□□□□ 0.41
CPSF1-207ENST00000531727 CYP8B1Q9UNU6 501 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 STON1Q9Y6Q2 735 aa17.61■□□□□ 0.41
CPSF1-207ENST00000531727 ATXN2Q99700 1313 aaKnown RBP17.61■□□□□ 0.41
CPSF1-207ENST00000531727 O00370 1275 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 GIPC1O14908 333 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 PMM2O15305 246 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 SETSIPP0DME0 302 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 CD44P16070 742 aaKnown RBP17.6■□□□□ 0.41
CPSF1-207ENST00000531727 ENGP17813 658 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 PPP1R2P41236 205 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 ZNF33AQ06730 810 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 PKDCCQ504Y2 493 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 SH3PXD2AQ5TCZ1 1133 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 ISM2Q6H9L7 571 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 ANKS1BQ7Z6G8 1248 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 FMNL3Q8IVF7 1028 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 DEFB119Q8N690 84 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 CEP76Q8TAP6 659 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 KCTD13Q8WZ19 329 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 SLC6A17Q9H1V8 727 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 THAP10Q9P2Z0 257 aaPredicted RBP17.6■□□□□ 0.41
CPSF1-207ENST00000531727 MAN1B1Q9UKM7 699 aa17.6■□□□□ 0.41
CPSF1-207ENST00000531727 HBS1LQ9Y450 684 aaKnown RBP17.6■□□□□ 0.41
CPSF1-207ENST00000531727 YJEFN3A6XGL0 299 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 E7ENQ6 273 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 CFIP05156 583 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 PAEPP09466 180 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 CSRP1P21291 193 aaKnown RBP17.59■□□□□ 0.41
CPSF1-207ENST00000531727 HARS2P49590 506 aaKnown RBP17.59■□□□□ 0.41
CPSF1-207ENST00000531727 ZNF132P52740 706 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 ENPP2Q13822 863 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 STARD3Q14849 445 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 E2F5Q15329 346 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 DUOXA1Q1HG43 343 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 UAP1L1Q3KQV9 507 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 CCDC40Q4G0X9 1142 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 BSPRYQ5W0U4 402 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 LCLAT1Q6UWP7 414 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 KIAA1324Q6UXG2 1013 aaKnown RBP17.59■□□□□ 0.41
CPSF1-207ENST00000531727 SIX6OS1Q8N1H7 587 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 SCML4Q8N228 414 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 RNF139Q8WU17 664 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 UCMAQ8WVF2 138 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 NT5C1BQ96P26 610 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 SLC2A11Q9BYW1 496 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 SLC6A14Q9UN76 642 aa17.59■□□□□ 0.41
CPSF1-207ENST00000531727 SERPINF2P08697 491 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 CEACAM1P13688 526 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 IL12RB1P42701 662 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 MAPK8P45983 427 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 DAOAP59103 153 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 ZNF252P-AS1Q0IIN9 211 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 EIF4HQ15056 248 aaKnown RBP17.58■□□□□ 0.4
CPSF1-207ENST00000531727 ST3GAL2Q16842 350 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 FUT11Q495W5 492 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 KLHL10Q6JEL2 608 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 TTI2Q6NXR4 508 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 FOXR2Q6PJQ5 311 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 TMEM270Q6UE05 265 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 RABEPKQ7Z6M1 372 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 SLC41A1Q8IVJ1 513 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 DDI1Q8WTU0 396 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 TFAP2BQ92481 460 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 EDEM1Q92611 657 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 PRDM16Q9HAZ2 1276 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 CD93Q9NPY3 652 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 CNGB3Q9NQW8 809 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 ABCC13Q9NSE7 274 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 ELOVL2Q9NXB9 296 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 SFMBT1Q9UHJ3 866 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 STOML2Q9UJZ1 356 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 CLEC4EQ9ULY5 219 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 PCDHB4Q9Y5E5 795 aa17.58■□□□□ 0.4
CPSF1-207ENST00000531727 PCDH15Q96QU1 1955 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 P4HA2O15460 535 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 LCP1P13796 627 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 CNGA2Q16280 664 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 MPPE1Q53F39 396 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 METTL3Q86U44 580 aaKnown RBP17.57■□□□□ 0.4
CPSF1-207ENST00000531727 PPM1KQ8N3J5 372 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 TRIML1Q8N9V2 468 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 RBBP8NLQ8NC74 664 aaPredicted RBP17.57■□□□□ 0.4
CPSF1-207ENST00000531727 LMO3Q8TAP4 145 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 SLC35F5Q8WV83 523 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 ZNF419Q96HQ0 510 aaPredicted RBP17.57■□□□□ 0.4
CPSF1-207ENST00000531727 HSPA12BQ96MM6 686 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 CAPN10Q9HC96 672 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.57■□□□□ 0.4
CPSF1-207ENST00000531727 ADAMTS9Q9P2N4 1935 aa17.57■□□□□ 0.4
CPSF1-207ENST00000531727 KMT2BQ9UMN6 2715 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-207ENST00000531727 PPP1R3GB7ZBB8 358 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 RNF225M0QZC1 329 aaPredicted RBP17.56■□□□□ 0.4
CPSF1-207ENST00000531727 NDUFS2O75306 463 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 GABBR2O75899 941 aa17.56■□□□□ 0.4
CPSF1-207ENST00000531727 LATS1O95835 1130 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms