RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 BBS7Q8IWZ6 715 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 CENPIQ92674 756 aaPredicted RBP15.07■□□□□ 0
CPSF1-206ENST00000531480 TRIM11Q96F44 468 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 MSANTD3Q96H12 275 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 NHEJ1Q9H9Q4 299 aaPredicted RBP15.07■□□□□ 0
CPSF1-206ENST00000531480 METTL5Q9NRN9 209 aaKnown RBP15.07■□□□□ 0
CPSF1-206ENST00000531480 CALCOCO1Q9P1Z2 691 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 LSM7Q9UK45 103 aaKnown RBP15.07■□□□□ 0
CPSF1-206ENST00000531480 AGO1Q9UL18 857 aaKnown RBP15.07■□□□□ 0
CPSF1-206ENST00000531480 WNT6Q9Y6F9 365 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 KIAA1549LQ6ZVL6 1849 aa15.07■□□□□ 0
CPSF1-206ENST00000531480 KRBA1A5PL33 1030 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 KCNU1A8MYU2 1149 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 GOLGA8SH3BPF8 625 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 KRT3P12035 628 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 ARSAP15289 507 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 CORO1AP31146 461 aaKnown RBP15.06■□□□□ 0
CPSF1-206ENST00000531480 IFNAR2P48551 515 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 TBX4P57082 545 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 STARD6P59095 220 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 PRKCQQ04759 706 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 GAB4Q2WGN9 574 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 ITPRIPL2Q3MIP1 535 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 SLC44A4Q53GD3 710 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 TRIM68Q6AZZ1 485 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 RHBDF2Q6PJF5 856 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 UNC45BQ8IWX7 931 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 CPXM2Q8N436 756 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 JOSD2Q8TAC2 188 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 FAM122AQ96E09 287 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 IRX2Q9BZI1 471 aaPredicted RBP15.06■□□□□ 0
CPSF1-206ENST00000531480 EBF3Q9H4W6 596 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 C8orf33Q9H7E9 229 aaPredicted RBP15.06■□□□□ 0
CPSF1-206ENST00000531480 ECT2Q9H8V3 914 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 GTSE1Q9NYZ3 720 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 MARK1Q9P0L2 795 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 STAP1Q9ULZ2 295 aa15.06■□□□□ 0
CPSF1-206ENST00000531480 FAM170AA1A519 330 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 ANKRD62A6NC57 917 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 TMCO5BA8MYB1 307 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 PRR33A8MZF0 331 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 LCA5LO95447 670 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 NFATC1O95644 943 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 F9P00740 461 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 CYP17A1P05093 508 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 IRF1P10914 325 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 TFE3P19532 575 aaPredicted RBP15.05■□□□□ -0
CPSF1-206ENST00000531480 RFC1P35251 1148 aaPredicted RBP15.05■□□□□ -0
CPSF1-206ENST00000531480 PLA2G5P39877 138 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 HARS2P49590 506 aaKnown RBP15.05■□□□□ -0
CPSF1-206ENST00000531480 CXCR3P49682 368 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 GFPT1Q06210 699 aaPredicted RBP15.05■□□□□ -0
CPSF1-206ENST00000531480 PPP2R5DQ14738 602 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 MLF2Q15773 248 aaPredicted RBP15.05■□□□□ -0
CPSF1-206ENST00000531480 CCDC14Q49A88 953 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 RNF43Q68DV7 783 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 DNAJC24Q6P3W2 148 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 C1orf228Q6PIY5 440 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 BMP8AQ7Z5Y6 402 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 RALGPS2Q86X27 583 aaPredicted RBP15.05■□□□□ -0
CPSF1-206ENST00000531480 DNAAF5Q86Y56 855 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 TMEM139Q8IV31 216 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 ZNF687Q8N1G0 1237 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 EMC1Q8N766 993 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 ADAM32Q8TC27 787 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 FNIP1Q8TF40 1166 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.05■□□□□ -0
CPSF1-206ENST00000531480 ARHGEF3Q9NR81 526 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 HEBP1Q9NRV9 189 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 PARVAQ9NVD7 372 aa15.05■□□□□ -0
CPSF1-206ENST00000531480 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.05■□□□□ -0
CPSF1-206ENST00000531480 MIA3Q5JRA6 1907 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 TMEM191CA6NGB0 347 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 M0QYT0 321 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 HOXC11O43248 304 aaPredicted RBP15.04■□□□□ -0
CPSF1-206ENST00000531480 GJB6O95452 261 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CYP1A2P05177 515 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 HMBSP08397 361 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 SLC2A3P11169 496 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 GBP1P32455 592 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CTHP32929 405 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CHKAP35790 457 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 ZNF143P52747 638 aaPredicted RBP15.04■□□□□ -0
CPSF1-206ENST00000531480 GSDMDP57764 484 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 RNASE9P60153 205 aaKnown RBP15.04■□□□□ -0
CPSF1-206ENST00000531480 RPL7AP62424 266 aaKnown RBP15.04■□□□□ -0
CPSF1-206ENST00000531480 MTA1Q13330 715 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 DHCR24Q15392 516 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 HS1BP3Q53T59 392 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CCDC122Q5T0U0 273 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 ADGRF1Q5T601 910 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 STRADAQ7RTN6 431 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 DENND1CQ8IV53 801 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CCDC170Q8IYT3 715 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CPA6Q8N4T0 437 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CSGALNACT1Q8TDX6 532 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 RXFP2Q8WXD0 754 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 P2RY11Q96G91 374 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CCDC42Q96M95 316 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CFAP57Q96MR6 1250 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms