RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 STC2O76061 302 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 KLKB1P03952 638 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 C4BPAP04003 597 aaKnown RBP9.7□□□□□ -0.86
NEDD8-206ENST00000531430 ZNF883P0CG24 379 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 CD58P19256 250 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 PRKCHP24723 683 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 ITPKBP27987 946 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 CORO1AP31146 461 aaKnown RBP9.7□□□□□ -0.86
NEDD8-206ENST00000531430 ACSL1P33121 698 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 AFMP43652 599 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 AP3M2P53677 418 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 CLDN6P56747 220 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 C21orf59P57076 290 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 COG7P83436 770 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 SLC39A14Q15043 492 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 E2F5Q15329 346 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 BMT2Q1RMZ1 405 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 RSRC2Q7L4I2 434 aaKnown RBP9.7□□□□□ -0.86
NEDD8-206ENST00000531430 EPM2AIP1Q7L775 607 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-206ENST00000531430 ANKS1BQ7Z6G8 1248 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 CRYBG2Q8N1P7 616 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 ZNF366Q8N895 744 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 IQUBQ8NA54 791 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 PLEKHO2Q8TD55 490 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 CYB5D2Q8WUJ1 264 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 DUSP9Q99956 384 aaKnown RBP9.7□□□□□ -0.86
NEDD8-206ENST00000531430 DCLK3Q9C098 648 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 LHX5Q9H2C1 402 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 MMRN2Q9H8L6 949 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 TM9SF3Q9HD45 589 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 CYLDQ9NQC7 956 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
NEDD8-206ENST00000531430 FTSJ1Q9UET6 329 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 CLEC4EQ9ULY5 219 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 PCDHGB2Q9Y5G2 931 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 SLCO1B1Q9Y6L6 691 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 PTPRBP23467 1997 aa9.7□□□□□ -0.86
NEDD8-206ENST00000531430 NPC1O15118 1278 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 STX6O43752 255 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 VNN1O95497 513 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 DNTTP04053 509 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 SYT1P21579 422 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 GRK6P43250 576 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 ZNF132P52740 706 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 COPAP53621 1224 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 DLG4P78352 724 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 KNOP1Q1ED39 458 aaKnown RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 FOXD4L6Q3SYB3 417 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 C8orf34Q49A92 452 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 ZNF394Q53GI3 561 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 FOXD4L5Q5VV16 416 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 FYB2Q5VWT5 728 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 CEP135Q66GS9 1140 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 FOXD4L3Q6VB84 417 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 Q6ZNB5 142 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 CLEC20AQ6ZU45 233 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 SCD5Q86SK9 330 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 UNC93AQ86WB7 457 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 GATAD2AQ86YP4 633 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 OR2T3Q8NH03 318 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 ADAM32Q8TC27 787 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 P2RY11Q96G91 374 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 HEXIM2Q96MH2 286 aaKnown RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 UBL7Q96S82 380 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 ARID3AQ99856 593 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 BTBD1Q9H0C5 482 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 CSNK1G1Q9HCP0 422 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 KBTBD4Q9NVX7 518 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 FBXO10Q9UK96 956 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 AGO1Q9UL18 857 aaKnown RBP9.69□□□□□ -0.86
NEDD8-206ENST00000531430 STRIP2Q9ULQ0 834 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 SLC27A6Q9Y2P4 619 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 NFE2L3Q9Y4A8 694 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 PCDHA5Q9Y5H7 936 aa9.69□□□□□ -0.86
NEDD8-206ENST00000531430 NUMA1Q14980 2115 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 CELSR3Q9NYQ7 3312 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 SPTLC2O15270 562 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 POLR2DO15514 142 aaKnown RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 RRP8O43159 456 aaKnown RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 TIMM44O43615 452 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 LDOC1O95751 146 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 SEMA4FO95754 770 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 RPN1P04843 607 aaKnown RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 ITGAVP06756 1048 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 EIF2S3P41091 472 aaKnown RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 PIK3CAP42336 1068 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 PSEN1P49768 467 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 CCT8P50990 548 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 C6orf118Q5T5N4 469 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 DBX2Q6ZNG2 339 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 UNC13DQ70J99 1090 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 CHST9Q7L1S5 443 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 ZNF605Q86T29 641 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 BAHD1Q8TBE0 780 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 PARD3BQ8TEW8 1205 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms