RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ZNF276Q8N554 614 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 CCDC150Q8NCX0 1101 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 EEF2KMTQ96G04 330 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 TOE1Q96GM8 510 aaKnown RBP19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 ARID3AQ99856 593 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 THAP10Q9P2Z0 257 aaPredicted RBP19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 AGO1Q9UL18 857 aaKnown RBP19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 ZNF510Q9Y2H8 683 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 MSRB2Q9Y3D2 182 aa19.33■□□□□ 0.68
SSSCA1-206ENST00000531405 KCNJ18B7U540 433 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 SH3BP5O60239 455 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 GJB3O75712 270 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 CHKAP35790 457 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 PSMC2P35998 433 aaKnown RBP19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 COG7P83436 770 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 ADAM9Q13443 819 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 SYCP2LQ5T4T6 812 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 SLC4A11Q8NBS3 891 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 SORCS1Q8WY21 1168 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 FOXJ1Q92949 421 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 CCDC47Q96A33 483 aaKnown RBP19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 PIWIL1Q96J94 861 aaKnown RBP19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 CDK5RAP1Q96SZ6 601 aaKnown RBP19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 GPR174Q9BXC1 333 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 FAM124BQ9H5Z6 455 aaPredicted RBP19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 CISHQ9NSE2 258 aa19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 WSB2Q9NYS7 404 aaPredicted RBP19.32■□□□□ 0.68
SSSCA1-206ENST00000531405 CABIN1Q9Y6J0 2220 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 SLC12A8A0AV02 714 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 MEI4A8MW99 385 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 RPL13P26373 211 aaKnown RBP19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 RAD23BP54727 409 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 YWHAGP61981 247 aaKnown RBP eCLIP19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 GRIK2Q13002 908 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 WDR45BQ5MNZ6 344 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 KRT39Q6A163 491 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 RSRC2Q7L4I2 434 aaKnown RBP19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 PIGZQ86VD9 579 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 GUF1Q8N442 669 aaKnown RBP19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 NDRG1Q92597 394 aaKnown RBP19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 TMEM176AQ96HP8 235 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 DCLK3Q9C098 648 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 DNAI2Q9GZS0 605 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 MARCH2Q9P0N8 246 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 USP36Q9P275 1121 aaKnown RBP19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 SUSD2Q9UGT4 822 aa19.31■□□□□ 0.68
SSSCA1-206ENST00000531405 NCAM1P13591 858 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 GNSP15586 552 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 PRKCHP24723 683 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 MXI1P50539 228 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 TPMTP51580 245 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ENPEPQ07075 957 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ENPP2Q13822 863 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ZNF234Q14588 700 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ZCWPW2Q504Y3 356 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 RAB41Q5JT25 222 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 TMEM215Q68D42 235 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ANKS1BQ7Z6G8 1248 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 METTL3Q86U44 580 aaKnown RBP19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 TMPRSS6Q8IU80 811 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 SMYD4Q8IYR2 804 aaPredicted RBP19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ZCCHC9Q8N567 271 aaKnown RBP19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 UCMAQ8WVF2 138 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 TATDN2Q93075 761 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 CIPCQ9C0C6 399 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 MIR1-1HGQ9H1L0 117 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ITM2CQ9NQX7 267 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 ZDHHC9Q9Y397 364 aa19.3■□□□□ 0.68
SSSCA1-206ENST00000531405 NYNRINQ9P2P1 1898 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 FAM237AA0A1B0GTK4 181 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 TULP2O00295 520 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 SYNCRIPO60506 623 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 GTF2H1P32780 548 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 TKTL1P51854 596 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 COPAP53621 1224 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 TRIP6Q15654 476 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 KRBA2Q6ZNG9 492 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 RAB44Q7Z6P3 723 aaPredicted RBP19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 NAXDQ8IW45 347 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 RBBP8NLQ8NC74 664 aaPredicted RBP19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 FBXL13Q8NEE6 735 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 DDI1Q8WTU0 396 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 SIPA1Q96FS4 1042 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 ULBP1Q9BZM6 244 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 GOLPH3LQ9H4A5 285 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 RAB20Q9NX57 234 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 ELOVL2Q9NXB9 296 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 STRIP2Q9ULQ0 834 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 CELSR3Q9NYQ7 3312 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 ADAMTS20P59510 1910 aa19.29■□□□□ 0.68
SSSCA1-206ENST00000531405 PLXNA2O75051 1894 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 H0Y626 953 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 NPC1O15118 1278 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 TRIM16O95361 564 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 CYBBP04839 570 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 KRT85P78386 507 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 SLC14A1Q13336 389 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 ZNF423Q2M1K9 1284 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 GOLGA7BQ2TAP0 167 aa19.28■□□□□ 0.68
SSSCA1-206ENST00000531405 DCAF12L1Q5VU92 463 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms