RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ELOA2Q8IYF1 753 aaPredicted RBP16.52■□□□□ 0.24
CPSF1-205ENST00000531042 DEFB119Q8N690 84 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 UBA3Q8TBC4 463 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 PLD4Q96BZ4 506 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 DHTKD1Q96HY7 919 aaPredicted RBP16.52■□□□□ 0.24
CPSF1-205ENST00000531042 MRGPRX1Q96LB2 322 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 LRRC4Q9HBW1 653 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 OLA1Q9NTK5 396 aaKnown RBP16.52■□□□□ 0.24
CPSF1-205ENST00000531042 STON1Q9Y6Q2 735 aa16.52■□□□□ 0.24
CPSF1-205ENST00000531042 PI4KAP42356 2102 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 O00370 1275 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 GIPC1O14908 333 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 NPC1O15118 1278 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 PMM2O15305 246 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
CPSF1-205ENST00000531042 ENGP17813 658 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 ZNF33AQ06730 810 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 ADIGQ0VDE8 80 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 TRIP4Q15650 581 aaPredicted RBP16.51■□□□□ 0.23
CPSF1-205ENST00000531042 PKDCCQ504Y2 493 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 SH3PXD2AQ5TCZ1 1133 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 FMNL3Q8IVF7 1028 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 KCTD13Q8WZ19 329 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 PIWIL1Q96J94 861 aaKnown RBP16.51■□□□□ 0.23
CPSF1-205ENST00000531042 CEP63Q96MT8 703 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
CPSF1-205ENST00000531042 SLC6A17Q9H1V8 727 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 THAP10Q9P2Z0 257 aaPredicted RBP16.51■□□□□ 0.23
CPSF1-205ENST00000531042 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 CLEC4EQ9ULY5 219 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 CYP8B1Q9UNU6 501 aa16.51■□□□□ 0.23
CPSF1-205ENST00000531042 GON4LQ3T8J9 2241 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 YJEFN3A6XGL0 299 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 E7ENQ6 273 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 PAEPP09466 180 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 SETSIPP0DME0 302 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 CSRP1P21291 193 aaKnown RBP16.5■□□□□ 0.23
CPSF1-205ENST00000531042 PPP1R2P41236 205 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 ZNF132P52740 706 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 ENPP2Q13822 863 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 DUOXA1Q1HG43 343 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 UAP1L1Q3KQV9 507 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 FUT11Q495W5 492 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 BSPRYQ5W0U4 402 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 TMEM270Q6UE05 265 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 LCLAT1Q6UWP7 414 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 ANKS1BQ7Z6G8 1248 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 SLC41A1Q8IVJ1 513 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 SIX6OS1Q8N1H7 587 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 SCML4Q8N228 414 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 CEP76Q8TAP6 659 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 DDI1Q8WTU0 396 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 UCMAQ8WVF2 138 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 EDEM1Q92611 657 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 NT5C1BQ96P26 610 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 SLC2A11Q9BYW1 496 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 CD93Q9NPY3 652 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 CNGB3Q9NQW8 809 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 SFMBT1Q9UHJ3 866 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 SLC6A14Q9UN76 642 aa16.5■□□□□ 0.23
CPSF1-205ENST00000531042 HBS1LQ9Y450 684 aaKnown RBP16.5■□□□□ 0.23
CPSF1-205ENST00000531042 ADAMTS9Q9P2N4 1935 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 CFIP05156 583 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 SERPINF2P08697 491 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 CEACAM1P13688 526 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 BMP6P22004 513 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 IL12RB1P42701 662 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 MAPK8P45983 427 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 MAP1BP46821 2468 aaKnown RBP16.49■□□□□ 0.23
CPSF1-205ENST00000531042 HARS2P49590 506 aaKnown RBP16.49■□□□□ 0.23
CPSF1-205ENST00000531042 DAOAP59103 153 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 STARD3Q14849 445 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 TTI2Q6NXR4 508 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 KIAA1324Q6UXG2 1013 aaKnown RBP16.49■□□□□ 0.23
CPSF1-205ENST00000531042 METTL3Q86U44 580 aaKnown RBP16.49■□□□□ 0.23
CPSF1-205ENST00000531042 PPM1KQ8N3J5 372 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 RBBP8NLQ8NC74 664 aaPredicted RBP16.49■□□□□ 0.23
CPSF1-205ENST00000531042 LMO3Q8TAP4 145 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 RNF139Q8WU17 664 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 SLC35F5Q8WV83 523 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 TFAP2BQ92481 460 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 ZNF419Q96HQ0 510 aaPredicted RBP16.49■□□□□ 0.23
CPSF1-205ENST00000531042 CAPN10Q9HC96 672 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 ABCC13Q9NSE7 274 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 ELOVL2Q9NXB9 296 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 PCDHB4Q9Y5E5 795 aa16.49■□□□□ 0.23
CPSF1-205ENST00000531042 ASCC3Q8N3C0 2202 aaKnown RBP16.48■□□□□ 0.23
CPSF1-205ENST00000531042 PPP1R3GB7ZBB8 358 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 RNF225M0QZC1 329 aaPredicted RBP16.48■□□□□ 0.23
CPSF1-205ENST00000531042 P4HA2O15460 535 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 GABBR2O75899 941 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 LCP1P13796 627 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 ZNF252P-AS1Q0IIN9 211 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 ZNF234Q14588 700 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 EIF4HQ15056 248 aaKnown RBP16.48■□□□□ 0.23
CPSF1-205ENST00000531042 E2F5Q15329 346 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 CNGA2Q16280 664 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 ST3GAL2Q16842 350 aa16.48■□□□□ 0.23
CPSF1-205ENST00000531042 MPPE1Q53F39 396 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms