RNA–Protein interactions for RNA: ENST00000528455.5

CD44-228, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-228ENST00000528455 KCNA5P22460 613 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 AMPD1P23109 780 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 CYP2F1P24903 491 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 KLRC2P26717 231 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 ADORA2BP29275 332 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 ELF1P32519 619 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 KCNQ1P51787 676 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 HADHBP55084 474 aaKnown RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 ARPP19P56211 112 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 GSCP56915 257 aaPredicted RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 MAP3K7CLP57077 242 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 ROR1Q01973 937 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 ADCY1Q08828 1119 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 TCEAL5Q5H9L2 206 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 RAB41Q5JT25 222 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 EFHC1Q5JVL4 640 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 NAA35Q5VZE5 725 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 EP400NLQ6ZTU2 488 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 TOGARAM2Q6ZUX3 1019 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 ARCQ7LC44 396 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 KIAA1328Q86T90 577 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 PIGZQ86VD9 579 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 PALB2Q86YC2 1186 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 REXO1L1PQ8IX06 675 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 RHOT2Q8IXI1 618 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 NUP93Q8N1F7 819 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 ATAD1Q8NBU5 361 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 C1orf131Q8NDD1 294 aaKnown RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 CTNNBL1Q8WYA6 563 aaPredicted RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 SECISBP2LQ93073 1101 aaKnown RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 PPP2R3CQ969Q6 453 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 MYLPFQ96A32 169 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 KCNK16Q96T55 309 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 TSGA10Q9BZW7 698 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 PLEKHA4Q9H4M7 779 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 LRRC4Q9HBW1 653 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 MRPL47Q9HD33 250 aaKnown RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 DMAP1Q9NPF5 467 aaPredicted RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 ENTPD7Q9NQZ7 604 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 PARVAQ9NVD7 372 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 TAS2R14Q9NYV8 317 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 EHD2Q9NZN4 543 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 FRRS1LQ9P0K9 344 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 CYTH4Q9UIA0 394 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 REXO2Q9Y3B8 237 aaKnown RBP7.77□□□□□ -1.17
CD44-228ENST00000528455 MUC3AQ02505 3323 aa7.77□□□□□ -1.17
CD44-228ENST00000528455 MYO7AQ13402 2215 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 GREB1Q4ZG55 1949 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 FAM92AA1XBS5 289 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 TMCO5BA8MYB1 307 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 HHLA1C9JL84 531 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 M0R082 166 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 MTA2O94776 668 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 RTN3O95197 1032 aaPredicted RBP7.76□□□□□ -1.17
CD44-228ENST00000528455 VNN2O95498 520 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 GHRHP01286 108 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 TUBB4AP04350 444 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 GLI1P08151 1106 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 OR4Q2P0C623 313 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ACPPP15309 386 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ARHGAP25P42331 645 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ALDH1A3P47895 512 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 DGKGP49619 791 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 SLC6A3Q01959 620 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 PDCLQ13371 301 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 IFI16Q16666 785 aaKnown RBP7.76□□□□□ -1.17
CD44-228ENST00000528455 LEXMQ3ZCV2 418 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 PLEKHA7Q6IQ23 1121 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 C8orf86Q6ZUL3 223 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 CCDC149Q6ZUS6 474 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 MON1BQ7L1V2 547 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 BEND5Q7L4P6 421 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ZSCAN30Q86W11 494 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 PASD1Q8IV76 773 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 GALNT12Q8IXK2 581 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 CCAR2Q8N163 923 aaKnown RBP7.76□□□□□ -1.17
CD44-228ENST00000528455 ZNF276Q8N554 614 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ZMIZ2Q8NF64 920 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 SLC35G2Q8TBE7 412 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 AUTS2Q8WXX7 1259 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 IRGQQ8WZA9 623 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 PLD4Q96BZ4 506 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 PABPC5Q96DU9 382 aaKnown RBP7.76□□□□□ -1.17
CD44-228ENST00000528455 MCRS1Q96EZ8 462 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 MYRFLQ96LU7 910 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 CPXM1Q96SM3 734 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
CD44-228ENST00000528455 CDCA3Q99618 268 aaPredicted RBP7.76□□□□□ -1.17
CD44-228ENST00000528455 SMG9Q9H0W8 520 aaKnown RBP7.76□□□□□ -1.17
CD44-228ENST00000528455 FBXO44Q9H4M3 255 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 SYNCQ9H7C4 482 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 CNGB3Q9NQW8 809 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 TMEM51Q9NW97 253 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 UVRAGQ9P2Y5 699 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 LCMT1Q9UIC8 334 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 PYCARDQ9ULZ3 195 aa7.76□□□□□ -1.17
CD44-228ENST00000528455 ASB3Q9Y575 518 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms