RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 FBF1Q8TES7 1133 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 PSPC1Q8WXF1 523 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 UTP4Q969X6 686 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 CPB2Q96IY4 423 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 HSPA12BQ96MM6 686 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 PNKPQ96T60 521 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 PAAF1Q9BRP4 392 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 RUSC1Q9BVN2 902 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 SPZ1Q9BXG8 430 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 NAA15Q9BXJ9 866 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 ANO3Q9BYT9 981 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CEP41Q9BYV8 373 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 NRSN2Q9GZP1 204 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 NXF3Q9H4D5 531 aaKnown RBP4.35□□□□□ -1.71
CHD7-205ENST00000527825 GAREM1Q9H706 876 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 GPRC5CQ9NQ84 441 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 TM7SF3Q9NS93 570 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CEP72Q9P209 647 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 VPS18Q9P253 973 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 MYO1AQ9UBC5 1043 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 STOML1Q9UBI4 398 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 MMP17Q9ULZ9 603 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.35□□□□□ -1.71
CHD7-205ENST00000527825 HPSEQ9Y251 543 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 CREBBPQ92793 2442 aa4.35□□□□□ -1.71
CHD7-205ENST00000527825 A0A0D9SFI3 127 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 LOC100289279A0A1B0GTE1 492 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TCRBV21S2A2A0A5A6 115 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TARSL2A2RTX5 802 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 BLACEA4D250 179 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 MEGF11A6BM72 1044 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ANKRD33BA6NCL7 494 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 A6NNZ2 444 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 MEI4A8MW99 385 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 INO80B-WBP1J3KQ70 363 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 IFIT3O14879 490 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 GSC2O15499 205 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ASAP2O43150 1006 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 KLK10O43240 276 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 CHMP2AO43633 222 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 BRINP1O60477 761 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 GJB3O75712 270 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ABLIM3O94929 683 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 CTDNEP1O95476 244 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SEC24AO95486 1093 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 NPTXRO95502 500 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 PRAMEF12O95522 483 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 KLF8O95600 359 aaPredicted RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 SYF2O95926 243 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 TGFB1P01137 390 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 CYP11A1P05108 521 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 P4HBP07237 508 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 ZNF883P0CG24 379 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 MCM3P25205 808 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ELAVL4P26378 380 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 GABRR2P28476 465 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SFNP31947 248 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 GJA4P35212 333 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SREBF1P36956 1147 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 AVPR1AP37288 418 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SSR1P43307 286 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 AFMP43652 599 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 IFNAR2P48551 515 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 FNTAP49354 379 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 GNAQP50148 359 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ADCY7P51828 1080 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 JAK3P52333 1124 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 EPHA5P54756 1037 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 GNG11P61952 73 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SCRN1Q12765 414 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 PDGFRLQ15198 375 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 PCBP1Q15365 356 aaKnown RBP eCLIP4.34□□□□□ -1.71
CHD7-205ENST00000527825 SEC23AQ15436 765 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TAF12Q16514 161 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SLC35G1Q2M3R5 365 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TBC1D25Q3MII6 688 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 CTXN3Q4LDR2 81 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 XKR3Q5GH77 459 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 RPS26P11Q5JNZ5 115 aaPredicted RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 WDR45BQ5MNZ6 344 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 EOGTQ5NDL2 527 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TRIM68Q6AZZ1 485 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ISM2Q6H9L7 571 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SLC8B1Q6J4K2 584 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 SLC27A1Q6PCB7 646 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 IL27RAQ6UWB1 636 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 NXPE4Q6UWF7 544 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 HEATR3Q7Z4Q2 680 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 BRAPQ7Z569 592 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 YTHDF3Q7Z739 585 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 EGFL6Q8IUX8 553 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 FRMD1Q8N878 549 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 TRIML1Q8N9V2 468 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 KCNE4Q8WWG9 221 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 ERCC4Q92889 916 aaPredicted RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 ATP2A3Q93084 1043 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 FAM46AQ96IP4 442 aaKnown RBP4.34□□□□□ -1.71
CHD7-205ENST00000527825 MYRFLQ96LU7 910 aa4.34□□□□□ -1.71
CHD7-205ENST00000527825 FAM227BQ96M60 508 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms