RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 PTK2Q05397 1052 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 HS1BP3Q53T59 392 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 TDRD12Q587J7 1177 aaKnown RBP22.03■■□□□ 1.12
PKP3-205ENST00000527442 SLC47A2Q86VL8 602 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 TTC30AQ86WT1 665 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 SFTPA1Q8IWL2 248 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 SLC4A11Q8NBS3 891 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 CCDC26Q8TAB7 109 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 NT5C1AQ9BXI3 368 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 SNX25Q9H3E2 840 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 HAUS4Q9H6D7 363 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 CEP192Q8TEP8 1941 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 MYOFQ9NZM1 2061 aa22.03■■□□□ 1.12
PKP3-205ENST00000527442 TMEM8BA6NDV4 472 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 SKILP12757 684 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 PI4KAP42356 2102 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 CRY1Q16526 586 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 KIAA1211LQ6NV74 962 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 TMEM92Q6UXU6 159 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 ZNF677Q86XU0 584 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 OR6B3Q8NGW1 331 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 OLIG1Q8TAK6 271 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 TMEM176AQ96HP8 235 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 FUBP3Q96I24 572 aaKnown RBP eCLIP22.02■■□□□ 1.12
PKP3-205ENST00000527442 CHP1Q99653 195 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 DNAI2Q9GZS0 605 aa22.02■■□□□ 1.12
PKP3-205ENST00000527442 EVLQ9UI08 416 aaPredicted RBP22.02■■□□□ 1.12
PKP3-205ENST00000527442 WDFY3Q8IZQ1 3526 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 ARHGAP6O43182 974 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 ATP2C2O75185 946 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 CYP17A1P05093 508 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 PLEKP08567 350 aaPredicted RBP22.01■■□□□ 1.11
PKP3-205ENST00000527442 CHRM1P11229 460 aaPredicted RBP22.01■■□□□ 1.11
PKP3-205ENST00000527442 GNA15P30679 374 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 GNL1P36915 607 aaPredicted RBP22.01■■□□□ 1.11
PKP3-205ENST00000527442 MESP2Q0VG99 397 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 ZNF394Q53GI3 561 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 ARMCX6Q7L4S7 300 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 NOP9Q86U38 636 aaKnown RBP22.01■■□□□ 1.11
PKP3-205ENST00000527442 CRYBG2Q8N1P7 616 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 RLN3Q8WXF3 142 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 ACP6Q9NPH0 428 aa22.01■■□□□ 1.11
PKP3-205ENST00000527442 SRRM3A6NNA2 597 aaPredicted RBP22■■□□□ 1.11
PKP3-205ENST00000527442 A8MXQ7 604 aa22■■□□□ 1.11
PKP3-205ENST00000527442 LEFTY2O00292 366 aa22■■□□□ 1.11
PKP3-205ENST00000527442 PCSK1P29120 753 aa22■■□□□ 1.11
PKP3-205ENST00000527442 P2RY2P41231 377 aa22■■□□□ 1.11
PKP3-205ENST00000527442 MAGEA11P43364 429 aa22■■□□□ 1.11
PKP3-205ENST00000527442 USP46P62068 366 aa22■■□□□ 1.11
PKP3-205ENST00000527442 PSMC1P62191 440 aaKnown RBP22■■□□□ 1.11
PKP3-205ENST00000527442 CDR2Q01850 454 aa22■■□□□ 1.11
PKP3-205ENST00000527442 ASTE1Q2TB18 679 aaPredicted RBP22■■□□□ 1.11
PKP3-205ENST00000527442 TRIM61Q5EBN2 209 aa22■■□□□ 1.11
PKP3-205ENST00000527442 ZNF571Q7Z3V5 609 aaPredicted RBP22■■□□□ 1.11
PKP3-205ENST00000527442 CCDC170Q8IYT3 715 aa22■■□□□ 1.11
PKP3-205ENST00000527442 ALLCQ8N6M5 410 aa22■■□□□ 1.11
PKP3-205ENST00000527442 FRMD1Q8N878 549 aa22■■□□□ 1.11
PKP3-205ENST00000527442 TNIP3Q96KP6 325 aa22■■□□□ 1.11
PKP3-205ENST00000527442 NHEJ1Q9H9Q4 299 aaPredicted RBP22■■□□□ 1.11
PKP3-205ENST00000527442 KIAA1257Q9ULG3 409 aa22■■□□□ 1.11
PKP3-205ENST00000527442 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 SOWAHDA6NJG2 315 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 SCAMP3O14828 347 aaKnown RBP21.99■■□□□ 1.11
PKP3-205ENST00000527442 VDRP11473 427 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 LMO2P25791 158 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 EIF4A3P38919 411 aaKnown RBP21.99■■□□□ 1.11
PKP3-205ENST00000527442 MRPS21P82921 87 aaKnown RBP21.99■■□□□ 1.11
PKP3-205ENST00000527442 FAM171BQ6P995 826 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 VPS36Q86VN1 386 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 TMEFF1Q8IYR6 380 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 SLC20A1Q8WUM9 679 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 ZCCHC14Q8WYQ9 949 aaKnown RBP21.99■■□□□ 1.11
PKP3-205ENST00000527442 MYLPFQ96A32 169 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 AGPAT1Q99943 283 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 SYT15Q9BQS2 421 aa21.99■■□□□ 1.11
PKP3-205ENST00000527442 ATXN2Q99700 1313 aaKnown RBP21.99■■□□□ 1.11
PKP3-205ENST00000527442 SGK1O00141 431 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 HYAL3O43820 417 aaPredicted RBP21.98■■□□□ 1.11
PKP3-205ENST00000527442 KLF8O95600 359 aaPredicted RBP21.98■■□□□ 1.11
PKP3-205ENST00000527442 CYLC1P35663 651 aaPredicted RBP21.98■■□□□ 1.11
PKP3-205ENST00000527442 PTGER3P43115 390 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 MAPK8P45983 427 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 SLC6A11P48066 632 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 KIF11P52732 1056 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 STILQ15468 1287 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 RAD9BQ6WBX8 426 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 LPCAT2Q7L5N7 544 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 IL17RCQ8NAC3 791 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 TXNDC5Q8NBS9 432 aaKnown RBP21.98■■□□□ 1.11
PKP3-205ENST00000527442 TRIM44Q96DX7 344 aaPredicted RBP21.98■■□□□ 1.11
PKP3-205ENST00000527442 SPATA17Q96L03 361 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 CCDC42Q96M95 316 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 ZSWIM1Q9BR11 485 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 DPEP3Q9H4B8 488 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 ZDHHC4Q9NPG8 344 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 CRTAC1Q9NQ79 661 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 TMEM74BQ9NUR3 256 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 MBD1Q9UIS9 605 aaPredicted RBP21.98■■□□□ 1.11
PKP3-205ENST00000527442 CDH9Q9ULB4 789 aa21.98■■□□□ 1.11
PKP3-205ENST00000527442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms