RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 GEN1Q17RS7 908 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 PMS2CLQ68D20 193 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 DPY19L2P1Q6NXN4 242 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 SIX6OS1Q8N1H7 587 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 CPXM2Q8N436 756 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 NETO1Q8TDF5 533 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 PLD4Q96BZ4 506 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 PIWIL1Q96J94 861 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 IPO9Q96P70 1041 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 GABRG3Q99928 467 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 RTKNQ9BST9 563 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 POLMQ9NP87 494 aaPredicted RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 CYTH4Q9UIA0 394 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 AJAP1Q9UKB5 411 aaPredicted RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 CDV3Q9UKY7 258 aaKnown RBP10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 SLC27A6Q9Y2P4 619 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 PCDHGA5Q9Y5G8 931 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 RAD54BQ9Y620 910 aa10.91□□□□□ -0.66
PRPF40B-204ENST00000527253 GOLGA6L7A0A1B0GV03 622 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 TM4SF5O14894 197 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 TSPAN3O60637 253 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 ALDH1A2O94788 518 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 FGFR1OPO95684 399 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 HOXB2P14652 356 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 CHKAP35790 457 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 SGSHP51688 502 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 CREB5Q02930 508 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 ELF2Q15723 593 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 PREPLQ4J6C6 727 aaPredicted RBP10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 TMEM215Q68D42 235 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 MSANTD2Q6P1R3 559 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 TRIM65Q6PJ69 517 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 CREBRFQ8IUR6 639 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 SCUBE3Q8IX30 993 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 RNF139Q8WU17 664 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 IRGQQ8WZA9 623 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 HSFY1Q96LI6 401 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 MIS12Q9H081 205 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 SLC6A17Q9H1V8 727 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 SIX2Q9NPC8 291 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 CD93Q9NPY3 652 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 VPS45Q9NRW7 570 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 ABCC13Q9NSE7 274 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 OLA1Q9NTK5 396 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 CACNA2D2Q9NY47 1150 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 BCCIPQ9P287 314 aaKnown RBP eCLIP10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 STOML2Q9UJZ1 356 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 HBS1LQ9Y450 684 aaKnown RBP10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 NUP205Q92621 2012 aa10.9□□□□□ -0.66
PRPF40B-204ENST00000527253 TPRP12270 2363 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 PATE3B3GLJ2 98 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 CAVIN2O95810 425 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 IGLV3-27P01718 113 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 KRT5P13647 590 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 NDUFV2P19404 249 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 SDHBP21912 280 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 PON1P27169 355 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 HOXD9P28356 352 aaPredicted RBP10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 PTGER3P43115 390 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 ENPP2Q13822 863 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 STILQ15468 1287 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 DPCR1Q3MIW9 517 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 AASDHQ4L235 1098 aaPredicted RBP10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 NUDT18Q6ZVK8 323 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 TRMT11Q7Z4G4 463 aaKnown RBP10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 TMEFF1Q8IYR6 380 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 CHPFQ8IZ52 775 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 PGBD3Q8N328 593 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 WDTC1Q8N5D0 677 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 MLKLQ8NB16 471 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 DDI1Q8WTU0 396 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 ZNF606Q8WXB4 792 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 SORCS1Q8WY21 1168 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 MYEOVQ96EZ4 313 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC4A5Q9BY07 1137 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 CALCOCO1Q9P1Z2 691 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 THAP10Q9P2Z0 257 aaPredicted RBP10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 TJP2Q9UDY2 1190 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 NAALADL1Q9UQQ1 740 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 STON1Q9Y6Q2 735 aa10.89□□□□□ -0.67
PRPF40B-204ENST00000527253 PAPSS1O43252 624 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 FBXO21O94952 628 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 LETM1O95202 739 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 LTFP02788 710 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC6A4P31645 630 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 IL12RB1P42701 662 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 DHPSP49366 369 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 HARS2P49590 506 aaKnown RBP10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 LIMK1P53667 647 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 ARHGAP44Q17R89 818 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 MPPE1Q53F39 396 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 ADGRF1Q5T601 910 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 STPG1Q5TH74 334 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 SYPL2Q5VXT5 272 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 NADSYN1Q6IA69 706 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 RFWD3Q6PCD5 774 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 CLEC17AQ6ZS10 378 aa10.88□□□□□ -0.67
PRPF40B-204ENST00000527253 ARMCX6Q7L4S7 300 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms