RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ZNF883P0CG24 379 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 KMT5BQ4FZB7 885 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 DCAF12L1Q5VU92 463 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 CEP135Q66GS9 1140 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 SLCO6A1Q86UG4 719 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 PRCCQ92733 491 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 PIWIL1Q96J94 861 aaKnown RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 NUP58Q9BVL2 599 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 DUSP16Q9BY84 665 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 DNAI2Q9GZS0 605 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 CCDC86Q9H6F5 360 aaKnown RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 ELOVL2Q9NXB9 296 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 KIAA1522Q9P206 1035 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 SERTAD1Q9UHV2 236 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 AGO1Q9UL18 857 aaKnown RBP16.91■□□□□ 0.3
PTPRU-210ENST00000527027 GPSM3Q9Y4H4 160 aa16.91■□□□□ 0.3
PTPRU-210ENST00000527027 BCAT2O15382 392 aaPredicted RBP16.9■□□□□ 0.3
PTPRU-210ENST00000527027 CILPO75339 1184 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 CER1O95813 267 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 IGLV3-19P01714 112 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 ACADMP11310 421 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 PDIA4P13667 645 aaKnown RBP16.9■□□□□ 0.3
PTPRU-210ENST00000527027 CD58P19256 250 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 CORO1AP31146 461 aaKnown RBP16.9■□□□□ 0.3
PTPRU-210ENST00000527027 VAMP7P51809 220 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 ZNF234Q14588 700 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
PTPRU-210ENST00000527027 IL27RAQ6UWB1 636 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
PTPRU-210ENST00000527027 SETD7Q8WTS6 366 aaKnown RBP16.9■□□□□ 0.3
PTPRU-210ENST00000527027 PAGE5Q96GU1 130 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 SLC2A11Q9BYW1 496 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 GAREM1Q9H706 876 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 IL21RQ9HBE5 538 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 RASAL2Q9UJF2 1139 aa16.9■□□□□ 0.3
PTPRU-210ENST00000527027 MAPK13O15264 365 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 TIMM44O43615 452 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 CALUO43852 315 aaPredicted RBP16.89■□□□□ 0.29
PTPRU-210ENST00000527027 CYBBP04839 570 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 HMBSP08397 361 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 MATKP42679 507 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 COPAP53621 1224 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 BNC1Q01954 994 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 EIF4HQ15056 248 aaKnown RBP16.89■□□□□ 0.29
PTPRU-210ENST00000527027 HLA-BQ31612 363 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
PTPRU-210ENST00000527027 C19orf48Q6RUI8 117 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 DBX2Q6ZNG2 339 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 ANKS1BQ7Z6G8 1248 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 DENND1CQ8IV53 801 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 C1orf216Q8TAB5 229 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 TAS1R2Q8TE23 839 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 CIPCQ9C0C6 399 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 NIF3L1Q9GZT8 377 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 TM7SF3Q9NS93 570 aa16.89■□□□□ 0.29
PTPRU-210ENST00000527027 EIF2B4Q9UI10 523 aaKnown RBP16.89■□□□□ 0.29
PTPRU-210ENST00000527027 ACTN4O43707 911 aaKnown RBP16.88■□□□□ 0.29
PTPRU-210ENST00000527027 EPHX1P07099 455 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 GCLMP48507 274 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 ARHGAP18Q8N392 663 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 CPXM2Q8N436 756 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 RBBP8NLQ8NC74 664 aaPredicted RBP16.88■□□□□ 0.29
PTPRU-210ENST00000527027 DDI1Q8WTU0 396 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 HEXIM2Q96MH2 286 aaKnown RBP16.88■□□□□ 0.29
PTPRU-210ENST00000527027 UBXN6Q9BZV1 441 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 PCED1AQ9H1Q7 454 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 MARCH2Q9P0N8 246 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 STRIP2Q9ULQ0 834 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 CLEC4EQ9ULY5 219 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 TRAF3IP3Q9Y228 551 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 PCDHGB2Q9Y5G2 931 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 MYH10P35580 1976 aa16.88■□□□□ 0.29
PTPRU-210ENST00000527027 IGSF10Q6WRI0 2623 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 SLC12A8A0AV02 714 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
PTPRU-210ENST00000527027 PRKCHP24723 683 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 PPP3CAQ08209 521 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 ZNF394Q53GI3 561 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 TMEM215Q68D42 235 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 SERPINA13PQ6UXR4 307 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 INTS8Q75QN2 995 aaKnown RBP16.87■□□□□ 0.29
PTPRU-210ENST00000527027 CCDC150Q8NCX0 1101 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 BAHD1Q8TBE0 780 aaPredicted RBP16.87■□□□□ 0.29
PTPRU-210ENST00000527027 SORCS1Q8WY21 1168 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 CDC6Q99741 560 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 RCOR1Q9UKL0 485 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
PTPRU-210ENST00000527027 FNDC3AQ9Y2H6 1198 aaKnown RBP16.87■□□□□ 0.29
PTPRU-210ENST00000527027 KNL1Q8NG31 2342 aa16.86■□□□□ 0.29
PTPRU-210ENST00000527027 LOC400499M0QZD8 3231 aa16.86■□□□□ 0.29
PTPRU-210ENST00000527027 A0A1B0GVT2 93 aa16.86■□□□□ 0.29
PTPRU-210ENST00000527027 FLRT2O43155 660 aa16.86■□□□□ 0.29
PTPRU-210ENST00000527027 F13A1P00488 732 aa16.86■□□□□ 0.29
PTPRU-210ENST00000527027 MYL1P05976 194 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms