RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ZFP14Q9HCL3 533 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 PIGVQ9NUD9 493 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 PRKAG3Q9UGI9 489 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 SALL4Q9UJQ4 1053 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 KIF26AQ9ULI4 1882 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-205ENST00000526954 A0A0U1RQJ8 604 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 LOC730098B7Z3J9 87 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 GREM1O60565 184 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 ECI2O75521 394 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 PROSCO94903 275 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 SLC2A3P11169 496 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 CCR1P32246 355 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 MAN1A1P33908 653 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 NOP2P46087 812 aaKnown RBP17.19■□□□□ 0.34
CAPN1-205ENST00000526954 HDAC4P56524 1084 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 DEUP1Q05D60 604 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 NME3Q13232 169 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 PPP2R5DQ14738 602 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 HS1BP3Q53T59 392 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 SH3PXD2AQ5TCZ1 1133 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 NUGGCQ68CJ6 796 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 TANGO2Q6ICL3 276 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 HTR3DQ70Z44 454 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 UNC45BQ8IWX7 931 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 FAM172AQ8WUF8 416 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 ATRIPQ8WXE1 791 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 NXPE3Q969Y0 559 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 RSPRY1Q96DX4 576 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 BTBD6Q96KE9 485 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 NCAPGQ9BPX3 1015 aa17.19■□□□□ 0.34
CAPN1-205ENST00000526954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAPN1-205ENST00000526954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAPN1-205ENST00000526954 E2F8A0AVK6 867 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 KCNU1A8MYU2 1149 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 KRT86O43790 486 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 RNF8O76064 485 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 VIPR2P41587 438 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 MTA1Q13330 715 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 HTR4Q13639 388 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 IFI16Q16666 785 aaKnown RBP17.18■□□□□ 0.34
CAPN1-205ENST00000526954 CDO1Q16878 200 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 ZC3H12AQ5D1E8 599 aaKnown RBP17.18■□□□□ 0.34
CAPN1-205ENST00000526954 BRMS1LQ5PSV4 323 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 PARM1Q6UWI2 310 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 SND1Q7KZF4 910 aaKnown RBP eCLIP17.18■□□□□ 0.34
CAPN1-205ENST00000526954 ADHFE1Q8IWW8 467 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 RNF10Q8N5U6 811 aaKnown RBP17.18■□□□□ 0.34
CAPN1-205ENST00000526954 ARFGAP1Q8N6T3 406 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 AZIN2Q96A70 460 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 RPGRIP1Q96KN7 1286 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 LRRC3BQ96PB8 259 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 ASB2Q96Q27 587 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 DCLK3Q9C098 648 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 ARHGEF38Q9NXL2 777 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 CFAP97Q9P2B7 532 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 TRIM10Q9UDY6 481 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 PAXBP1Q9Y5B6 917 aa17.18■□□□□ 0.34
CAPN1-205ENST00000526954 SYNJ2BP-COX16A0A087WUM0 186 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 HEPACAM2A8MVW5 462 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 ZSCAN12O43309 604 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 LATS1O95835 1130 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 KLKB1P03952 638 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 HMBSP08397 361 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 BMP1P13497 986 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 SP100P23497 879 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-205ENST00000526954 PCK1P35558 622 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 HARS2P49590 506 aaKnown RBP17.17■□□□□ 0.34
CAPN1-205ENST00000526954 ATXN1P54253 815 aaKnown RBP17.17■□□□□ 0.34
CAPN1-205ENST00000526954 RAB6CQ53S08 254 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 VITQ6UXI7 678 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 Q6ZNB5 142 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 MFSD6LQ8IWD5 586 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 TPCN2Q8NHX9 752 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 RIN3Q8TB24 985 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 BPIFB1Q8TDL5 484 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 FGF14Q92915 247 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 WBP2Q969T9 261 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 RAB6CQ9H0N0 254 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 WDCPQ9H6R7 721 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 COX16Q9P0S2 106 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 LSM7Q9UK45 103 aaKnown RBP17.17■□□□□ 0.34
CAPN1-205ENST00000526954 PYCARDQ9ULZ3 195 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 ZNF510Q9Y2H8 683 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 SH3BP1Q9Y3L3 701 aa17.17■□□□□ 0.34
CAPN1-205ENST00000526954 MYO10Q9HD67 2058 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 BUB1BO60566 1050 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-205ENST00000526954 LRCH4O75427 683 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 APOEP02649 317 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 IRF1P10914 325 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 AIF1P55008 147 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 ZP2Q05996 745 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 FCHO2Q0JRZ9 810 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 MESDQ14696 234 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 C11orf63Q6NUN7 778 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 REXO1L1PQ8IX06 675 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 DEPDC1BQ8WUY9 529 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 RNF34Q969K3 372 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 NTAN1Q96AB6 310 aa17.16■□□□□ 0.34
CAPN1-205ENST00000526954 BTN2A3PQ96KV6 586 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms