RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 CDCP2Q5VXM1 449 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 DPH6Q7L8W6 267 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 HS2ST1Q7LGA3 356 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 BRSK2Q8IWQ3 736 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 MYCT1Q8N699 235 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 OR2T3Q8NH03 318 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 PIWIL1Q96J94 861 aaKnown RBP14.27□□□□□ -0.13
SSRP1-203ENST00000526696 KCNK16Q96T55 309 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 BTBD1Q9H0C5 482 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 ITGA11Q9UKX5 1188 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 TDRD6O60522 2096 aaKnown RBP14.27□□□□□ -0.13
SSRP1-203ENST00000526696 ITPR3Q14573 2671 aa14.27□□□□□ -0.13
SSRP1-203ENST00000526696 A0A1W2PPC4 97 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 A0A1W2PR77 199 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 EFSO43281 561 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 USP12O75317 370 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 PENKP01210 267 aaPredicted RBP14.26□□□□□ -0.13
SSRP1-203ENST00000526696 TOB1P50616 345 aaPredicted RBP14.26□□□□□ -0.13
SSRP1-203ENST00000526696 TRIM29Q14134 588 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 ME3Q16798 604 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 SLFN12LQ6IEE8 588 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 Q6ZNB5 142 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 LSMEM2Q8N112 164 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 GTF3C6Q969F1 213 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 PSMG3-AS1Q96PY0 264 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 MRPL45Q9BRJ2 306 aaKnown RBP14.26□□□□□ -0.13
SSRP1-203ENST00000526696 B3GNT5Q9BYG0 378 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 MTMR12Q9C0I1 747 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 DPEP3Q9H4B8 488 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 POLR1BQ9H9Y6 1135 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 ELOVL2Q9NXB9 296 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 ODF2LQ9ULJ1 636 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 PAXBP1Q9Y5B6 917 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 POLQO75417 2590 aa14.26□□□□□ -0.13
SSRP1-203ENST00000526696 FAM92AA1XBS5 289 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 TULP1O00294 542 aaPredicted RBP14.25□□□□□ -0.13
SSRP1-203ENST00000526696 TRIM38O00635 465 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 TLR5O60602 858 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 RTN3O95197 1032 aaPredicted RBP14.25□□□□□ -0.13
SSRP1-203ENST00000526696 SCP2P22307 547 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 CCR10P46092 362 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 RPS14P62263 151 aaKnown RBP14.25□□□□□ -0.13
SSRP1-203ENST00000526696 RBP5P82980 135 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 TLE1Q04724 770 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 GRIN1Q05586 938 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 SERINC3Q13530 473 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 ARL13BQ3SXY8 428 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 FYB2Q5VWT5 728 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 KIAA0895LQ68EN5 471 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 ZNF366Q8N895 744 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 POMGNT1Q8WZA1 660 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 SAAL1Q96ER3 474 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 FAM213AQ9BRX8 229 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 RAB34Q9BZG1 259 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 PARVGQ9HBI0 331 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 MAN2B2Q9Y2E5 1009 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 FBN2P35556 2912 aa14.25□□□□□ -0.13
SSRP1-203ENST00000526696 C10orf142B7Z368 130 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 PTPN1P18031 435 aaKnown RBP14.24□□□□□ -0.13
SSRP1-203ENST00000526696 RXRGP48443 463 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 SLC5A3P53794 718 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 E2F1Q01094 437 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 TMEM119Q4V9L6 283 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 SERPINA13PQ6UXR4 307 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 CCDC81Q6ZN84 652 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 CACTINQ8WUQ7 758 aaKnown RBP14.24□□□□□ -0.13
SSRP1-203ENST00000526696 UCMAQ8WVF2 138 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 HPDLQ96IR7 371 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 MMS19Q96T76 1030 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 ELOVL4Q9GZR5 314 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 PDE11AQ9HCR9 933 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.133e-12■■■■■ 60.6
SSRP1-203ENST00000526696 GDF3Q9NR23 364 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 OSER1Q9NX31 292 aa14.24□□□□□ -0.13
SSRP1-203ENST00000526696 RP1P56715 2156 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 PMS2P1A4D2B8 440 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 MDM4O15151 490 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 YKT6O15498 198 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 SIGLEC6O43699 453 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 FAM13AO94988 1023 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 REC8O95072 547 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 CLN3Q13286 438 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 KCNJ12Q14500 433 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 PAQR9Q6ZVX9 377 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 ANKS1BQ7Z6G8 1248 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 SPATS2Q86XZ4 545 aaKnown RBP14.23□□□□□ -0.13
SSRP1-203ENST00000526696 OR5B17Q8NGF7 314 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 EXTL1Q92935 676 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 PRR11Q96HE9 360 aaPredicted RBP14.23□□□□□ -0.13
SSRP1-203ENST00000526696 NACA2Q9H009 215 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 TMEM245Q9H330 911 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 FOXP1Q9H334 677 aaPredicted RBP14.23□□□□□ -0.13
SSRP1-203ENST00000526696 SGK2Q9HBY8 427 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 THSD1Q9NS62 852 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 LRBAP50851 2863 aa14.23□□□□□ -0.13
SSRP1-203ENST00000526696 FAM47DPA6NHR8 397 aa14.22□□□□□ -0.13
SSRP1-203ENST00000526696 OPA1O60313 960 aa14.22□□□□□ -0.13
SSRP1-203ENST00000526696 CSO75390 466 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms