RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 ZNF234Q14588 700 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 SHC4Q6S5L8 630 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 GPRIN1Q7Z2K8 1008 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 NXPE2Q96DL1 559 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 FCRL3Q96P31 734 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 FBXO44Q9H4M3 255 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 C6orf106Q9H6K1 298 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 CYLDQ9NQC7 956 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 RAI2Q9Y5P3 530 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 MGAQ8IWI9 3026 aa13.15□□□□□ -0.3
CCDC90B-205ENST00000525916 ARID1BQ8NFD5 2236 aaPredicted RBP13.15□□□□□ -0.31
CCDC90B-205ENST00000525916 DOCK9Q9BZ29 2069 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 A0A087X0B3 334 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 H0Y8X5 98 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 STC2O76061 302 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 CLSTN1O94985 981 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 STAU1O95793 577 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 EPHX1P07099 455 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 ACSL1P33121 698 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 EIF2S3P41091 472 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 ME1P48163 572 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF132P52740 706 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 MAP3K7CLP57077 242 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 SEMG2Q02383 582 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 CYP24A1Q07973 514 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 PSMD6Q15008 389 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 TEAD4Q15561 434 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 KCNT1Q5JUK3 1230 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 FYB2Q5VWT5 728 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF605Q86T29 641 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 ACOT1Q86TX2 421 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 TMPRSS12Q86WS5 348 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 UCMAQ8WVF2 138 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 SORCS1Q8WY21 1168 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 IGSF8Q969P0 613 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 JAKMIP2Q96AA8 810 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 TNIP3Q96KP6 325 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 TM9SF3Q9HD45 589 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 FTSJ1Q9UET6 329 aa13.14□□□□□ -0.31
CCDC90B-205ENST00000525916 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 CBX4O00257 560 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 NPC1O15118 1278 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 CLIC2O15247 247 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 PCDHGA12O60330 932 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 PENKP01210 267 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 TXLNAP40222 546 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 STAT6P42226 847 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 GRIA4P48058 902 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 CYP2J2P51589 502 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 RESP18Q5W5W9 173 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 LRRC69Q6ZNQ3 347 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 STXBP4Q6ZWJ1 553 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 CCDC65Q8IXS2 484 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 ENGASEQ8NFI3 743 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 CIPCQ9C0C6 399 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 PCED1AQ9H1Q7 454 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 AGPAT3Q9NRZ7 376 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 FAM49BQ9NUQ9 324 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF462Q96JM2 2506 aa13.13□□□□□ -0.31
CCDC90B-205ENST00000525916 FAM237AA0A1B0GTK4 181 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 PHACTR2O75167 634 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 KLKB1P03952 638 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 RARGP13631 454 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 CMA1P23946 247 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 ATICP31939 592 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 PLA2G4AP47712 749 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 CASP4P49662 377 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF699Q32M78 642 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 INAVAQ3KP66 663 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 ZNF667Q5HYK9 610 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 C6orf118Q5T5N4 469 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 SERPINA13PQ6UXR4 307 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 ANKS1BQ7Z6G8 1248 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 RBBP8NLQ8NC74 664 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 BIRC7Q96CA5 298 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 LHX5Q9H2C1 402 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 ELOVL2Q9NXB9 296 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 DNMT3LQ9UJW3 386 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 CLEC4EQ9ULY5 219 aa13.12□□□□□ -0.31
CCDC90B-205ENST00000525916 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms