RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 DPCR1Q3MIW9 517 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 FYB2Q5VWT5 728 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 C11orf74Q86VG3 221 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 C12orf50Q8NA57 414 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-203ENST00000525013 CLEC4CQ8WTT0 213 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 DDI1Q8WTU0 396 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 RLN3Q8WXF3 142 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 ERLEC1Q96DZ1 483 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 P2RY11Q96G91 374 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 ACOX2Q99424 681 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 ZBTB24O43167 697 aaPredicted RBP19.37■□□□□ 0.69
CAPN1-203ENST00000525013 MAP3K13O43283 966 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 THAP12O43422 761 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 MED7O43513 233 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 PENKP01210 267 aaPredicted RBP19.37■□□□□ 0.69
CAPN1-203ENST00000525013 LTFP02788 710 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 MPLP40238 635 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 APBA1Q02410 837 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 CREB5Q02930 508 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 AASDHQ4L235 1098 aaPredicted RBP19.37■□□□□ 0.69
CAPN1-203ENST00000525013 DENND1BQ6P3S1 775 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 FAM114A1Q8IWE2 563 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 CPXM2Q8N436 756 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 SPACA7Q96KW9 195 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 FAM81BQ96LP2 452 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 THAP9Q9H5L6 903 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 APEX2Q9UBZ4 518 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 DACH1Q9UI36 760 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 FBXO10Q9UK96 956 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 PCDHGA5Q9Y5G8 931 aa19.37■□□□□ 0.69
CAPN1-203ENST00000525013 PI4KAP42356 2102 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 CEP192Q8TEP8 1941 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 GDF9O60383 454 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 TSPAN3O60637 253 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 ZNF806P0C7X5 589 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 BCKDHBP21953 392 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 GNA15P30679 374 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 ATXN1P54253 815 aaKnown RBP19.36■□□□□ 0.69
CAPN1-203ENST00000525013 HSP90AA4PQ58FG1 418 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 SCUBE3Q8IX30 993 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 NETO1Q8TDF5 533 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 ZNF606Q8WXB4 792 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 SMOC1Q9H4F8 434 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 ACP6Q9NPH0 428 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 CACNA2D2Q9NY47 1150 aa19.36■□□□□ 0.69
CAPN1-203ENST00000525013 GTPBP10A4D1E9 387 aaKnown RBP19.35■□□□□ 0.69
CAPN1-203ENST00000525013 PRKCSHP14314 528 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-203ENST00000525013 PON1P27169 355 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 ERCC5P28715 1186 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-203ENST00000525013 GPD2P43304 727 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 DHPSP49366 369 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-203ENST00000525013 BYSLQ13895 437 aaKnown RBP19.35■□□□□ 0.69
CAPN1-203ENST00000525013 MAN2A1Q16706 1144 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 MPPE1Q53F39 396 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 PMS2CLQ68D20 193 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 MSANTD2Q6P1R3 559 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 OLIG1Q8TAK6 271 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 FAM149B1Q96BN6 582 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 SLC27A6Q9Y2P4 619 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 PLXND1Q9Y4D7 1925 aa19.35■□□□□ 0.69
CAPN1-203ENST00000525013 NCOR2Q9Y618 2525 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 A0A1W2PQF6 199 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 DCDC2BA2VCK2 349 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 SART1O43290 800 aaKnown RBP19.34■□□□□ 0.69
CAPN1-203ENST00000525013 NCAM1P13591 858 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 GABRG2P18507 467 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 P2RY2P41231 377 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 ACADSBP45954 432 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 GEN1Q17RS7 908 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 ADGRF1Q5T601 910 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 ANKS1BQ7Z6G8 1248 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 FAM217AQ8IXS0 508 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 FRMD1Q8N878 549 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 IPO4Q8TEX9 1081 aaKnown RBP19.34■□□□□ 0.69
CAPN1-203ENST00000525013 UCMAQ8WVF2 138 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 TMA16Q96EY4 203 aaKnown RBP19.34■□□□□ 0.69
CAPN1-203ENST00000525013 RTKNQ9BST9 563 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 VPS45Q9NRW7 570 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 CLEC4EQ9ULY5 219 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 RAD54BQ9Y620 910 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 LAMA1P25391 3075 aa19.34■□□□□ 0.69
CAPN1-203ENST00000525013 BCLAF3A2AJT9 711 aaKnown RBP19.33■□□□□ 0.68
CAPN1-203ENST00000525013 BECN2A8MW95 431 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 WASH3PC4AMC7 463 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 PES1O00541 588 aaKnown RBP19.33■□□□□ 0.68
CAPN1-203ENST00000525013 CAVIN2O95810 425 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 SLC11A2P49281 568 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 TBX4P57082 545 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 MAP7D1Q3KQU3 841 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 PLA2G2CQ5R387 149 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 KIAA1211LQ6NV74 962 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 CLEC17AQ6ZS10 378 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 LPCAT2Q7L5N7 544 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 UNC45BQ8IWX7 931 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 STK32AQ8WU08 396 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 SHC3Q92529 594 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 PIWIL1Q96J94 861 aaKnown RBP19.33■□□□□ 0.68
CAPN1-203ENST00000525013 GABRG3Q99928 467 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 TUBGCP2Q9BSJ2 902 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms