RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TMLHEQ9NVH6 421 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 GPATCH2LQ9NWQ4 482 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 MARCH5Q9NX47 278 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 VPS18Q9P253 973 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 NEU2Q9Y3R4 380 aa10.34□□□□□ -0.75
VPS13B-212ENST00000524330 FGF10O15520 208 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 KCNN4O15554 427 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 CREB3O43889 395 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 APOEP02649 317 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 HAPLN1P10915 354 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 TSHRP16473 764 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 IGFBP6P24592 240 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 C1QTNF8P60827 252 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 IFRD2Q12894 506 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 PPIGQ13427 754 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■■■□ 23.4
VPS13B-212ENST00000524330 BTG3Q14201 252 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 PPP2R5DQ14738 602 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 TRADDQ15628 312 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 PSMD5Q16401 504 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 KRT71Q3SY84 523 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 MGAT5BQ3V5L5 792 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 SLC45A4Q5BKX6 768 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 TPGS2Q68CL5 300 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 MFSD5Q6N075 450 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 ARHGEF18Q6ZSZ5 1173 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 GPRIN1Q7Z2K8 1008 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 ZC3H18Q86VM9 953 aaKnown RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 PDIK1LQ8N165 341 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 LZTR1Q8N653 840 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 CCDC185Q8N715 623 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 PCDH19Q8TAB3 1148 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 DQX1Q8TE96 717 aaKnown RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 PIK3R5Q8WYR1 880 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 NDRG1Q92597 394 aaKnown RBP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 FBXO32Q969P5 355 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 TOP1MTQ969P6 601 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 IGSF21Q96ID5 467 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 HAPLN3Q96S86 360 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 TMEM209Q96SK2 561 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 FAM118BQ9BPY3 351 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 HERC2P3Q9BVR0 1158 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 GPR62Q9BZJ7 368 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 NEUROG2Q9H2A3 272 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 SMOC2Q9H3U7 446 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
VPS13B-212ENST00000524330 CLIC5Q9NZA1 410 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 SPG21Q9NZD8 308 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 PCDHB12Q9Y5F1 795 aa10.33□□□□□ -0.76
VPS13B-212ENST00000524330 MTMR11A4FU01 709 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 E7EVH7 732 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 TNFRSF10BO14763 440 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CHADO15335 359 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 SOD2P04179 222 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 URODP06132 367 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 OR4Q2P0C623 313 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 PECAM1P16284 738 aaPredicted RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 IL4RP24394 825 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 IVDP26440 423 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 ELF1P32519 619 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 FDFT1P37268 417 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 LMAN1P49257 510 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 GLUD2P49448 558 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 MNX1P50219 401 aaPredicted RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 GATMP50440 423 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CACNA2D1P54289 1103 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 BASP1P80723 227 aaKnown RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 PLD1Q13393 1074 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 STAT4Q14765 748 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 VEPH1Q14D04 833 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 PAFAH1B3Q15102 231 aaKnown RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CA9Q16790 459 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CCDC142Q17RM4 750 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 DNAJC21Q5F1R6 531 aaKnown RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 SYPL2Q5VXT5 272 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 MSANTD2Q6P1R3 559 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 RHBDF2Q6PJF5 856 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 KCNT2Q6UVM3 1135 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 LRRC31Q6UY01 552 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 RFX8Q6ZV50 586 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 HFE2Q6ZVN8 426 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 ANKS1BQ7Z6G8 1248 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 TAC4Q86UU9 113 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 VPS52Q8N1B4 723 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 PQLC3Q8N755 202 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 ATP6V0D2Q8N8Y2 350 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 FAM71DQ8N9W8 422 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 STKLD1Q8NE28 680 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 FBXO22Q8NEZ5 403 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 OVCA2Q8WZ82 227 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 EDEM1Q92611 657 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 EXOC4Q96A65 974 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 RTP4Q96DX8 246 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 ATP6V1G3Q96LB4 118 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 PPP1R2P1Q96PQ5 205 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 QKIQ96PU8 341 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 SEPT5Q99719 369 aaPredicted RBP10.32□□□□□ -0.76
VPS13B-212ENST00000524330 TMEM109Q9BVC6 243 aa10.32□□□□□ -0.76
VPS13B-212ENST00000524330 TXLNGYQ9BZA5 131 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms