RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 CASC1Q6TDU7 716 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 PARS2Q7L3T8 475 aaKnown RBP3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 MAEAQ7L5Y9 396 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 WDR53Q7Z5U6 358 aaPredicted RBP3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZNF366Q8N895 744 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 TMEM171Q8WVE6 324 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 MEIS3Q99687 375 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 MACROD1Q9BQ69 325 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 DPCDQ9BVM2 203 aaPredicted RBP3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 TMEM60Q9H2L4 133 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 FAM204AQ9H8W3 233 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 DUSP22Q9NRW4 184 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 RBM28Q9NW13 759 aaKnown RBP3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZSCAN32Q9NX65 697 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 MIS18AQ9NYP9 233 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 RAI14Q9P0K7 980 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 G3BP2Q9UN86 482 aaKnown RBP3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 ADAMTS5Q9UNA0 930 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 TBC1D30Q9Y2I9 924 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZNF804BA4D1E1 1349 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 TMEM94Q12767 1356 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 IBTKQ9P2D0 1353 aaPredicted RBP3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 NUP188Q5SRE5 1749 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 ITGB4P16144 1822 aa3.83□□□□□ -1.8
LINCR-0001-203ENST00000524047 CACNA1IQ9P0X4 2223 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 ANKRD36CQ5JPF3 1778 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 PLCH1Q4KWH8 1693 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 CPDO75976 1380 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 HEG1Q9ULI3 1381 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZNF213O14771 459 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 ERC2O15083 957 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 TBX3O15119 743 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 RNMTO43148 476 aaKnown RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 PDE8BO95263 885 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 BRAFP15056 766 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 EN2P19622 333 aaPredicted RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 KCNA3P22001 575 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 DGKEP52429 567 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 CYP4F2P78329 520 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 TFF2Q03403 129 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 SLC10A2Q12908 348 aaPredicted RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 OS9Q13438 667 aaPredicted RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 SRSF7Q16629 238 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 LY6KQ17RY6 165 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 TTC22Q5TAA0 569 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 DCAF12L1Q5VU92 463 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 PPP4R4Q6NUP7 873 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 SWSAP1Q6NVH7 229 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZNF782Q6ZMW2 699 aaPredicted RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 G2E3Q7L622 706 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 GAS2L3Q86XJ1 694 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 HSCBQ8IWL3 235 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 MAGEB6Q8N7X4 407 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 BPIFB1Q8TDL5 484 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 PPP2R3CQ969Q6 453 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 SNX21Q969T3 373 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 REPS1Q96D71 796 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 PRDM16Q9HAZ2 1276 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 GBA2Q9HCG7 927 aaPredicted RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 C1orf112Q9NSG2 853 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 SACM1LQ9NTJ5 587 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 TRMT13Q9NUP7 481 aaKnown RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 DBF4Q9UBU7 674 aaPredicted RBP3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 SNX14Q9Y5W7 946 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 MYH3P11055 1940 aa3.82□□□□□ -1.8
LINCR-0001-203ENST00000524047 GLI3P10071 1580 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 TULP2O00295 520 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 EPB41L2O43491 1005 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 RASAL1O95294 804 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 HSP90AB1P08238 724 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 UBTFL1P0CB47 393 aaPredicted RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 NHLRC4P0CG21 123 aaPredicted RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 SUMO3P55854 103 aaPredicted RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 MLC1Q15049 377 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 CNN3Q15417 329 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 HSP90AB4PQ58FF6 505 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 PRAMEF17Q5VTA0 474 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 CTR9Q6PD62 1173 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 APOA5Q6Q788 366 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 DPY19L3Q6ZPD9 716 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 CCDC149Q6ZUS6 474 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 Q6ZWC4 215 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 CAND1Q86VP6 1230 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 CERS3Q8IU89 383 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 TCEAL8Q8IYN2 117 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 IZUMO1Q8IYV9 350 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 KIAA0319LQ8IZA0 1049 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 SPARTQ8N0X7 666 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 ABRAQ8N0Z2 381 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 ABHD11Q8NFV4 315 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 RP9Q8TA86 221 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 SOCS4Q8WXH5 440 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 DNAAF4Q8WXU2 420 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 LRRC59Q96AG4 307 aaKnown RBP3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 SUCLG2Q96I99 432 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 FSD1LQ9BXM9 530 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 DPH1Q9BZG8 443 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 LRRCC1Q9C099 1032 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 SEMA4CQ9C0C4 833 aa3.81□□□□□ -1.8
LINCR-0001-203ENST00000524047 ZNF518BQ9C0D4 1074 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms