RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 RELL1Q8IUW5 271 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 ZMIZ2Q8NF64 920 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SPATA20Q8TB22 786 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 NETO1Q8TDF5 533 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 USP33Q8TEY7 942 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 ACDQ96AP0 544 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 EAF1Q96JC9 268 aaPredicted RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 TMEM74Q96NL1 305 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 KCNK16Q96T55 309 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 HNRNPABQ99729 332 aaKnown RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SMOQ99835 787 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 LINC00597Q9H2U6 94 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 FBXO44Q9H4M3 255 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SMYD3Q9H7B4 428 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 CYP3A43Q9HB55 503 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 TRPC7Q9HCX4 862 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 DMAP1Q9NPF5 467 aaPredicted RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 LATS2Q9NRM7 1088 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SEMA4GQ9NTN9 838 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SIRPGQ9P1W8 387 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 TBC1D14Q9P2M4 693 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 NXF1Q9UBU9 619 aaKnown RBP6.34□□□□□ -1.39
FAM49B-228ENST00000523993 SLC8A2Q9UPR5 921 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 FRMD4BQ9Y2L6 1034 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 WNT6Q9Y6F9 365 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 CACNA1BQ00975 2339 aa6.34□□□□□ -1.39
FAM49B-228ENST00000523993 MAP1BP46821 2468 aaKnown RBP6.34□□□□□ -1.4
FAM49B-228ENST00000523993 MED19A0JLT2 244 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 HHLA1C9JL84 531 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 TM4SF5O14894 197 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 HOXC11O43248 304 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 COCHO43405 550 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 CALUO43852 315 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 GREM1O60565 184 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 CILPO75339 1184 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 FBXO24O75426 580 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 RPP40O75818 363 aaKnown RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 BEST1O76090 585 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 ZNF202O95125 648 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 APBB3O95704 486 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 HLA-DRAP01903 254 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 CYP17A1P05093 508 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 TIMP2P16035 220 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 NR2F2P24468 414 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 RPL13P26373 211 aaKnown RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 HOXC13P31276 330 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 TNFRSF4P43489 277 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 KIR2DL1P43626 348 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 VAMP7P51809 220 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 NDST1P52848 882 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 SLC5A3P53794 718 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 PPP3CAQ08209 521 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 SPEM2Q0P670 501 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 SRSF5Q13243 272 aaKnown RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 BIRC3Q13489 604 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 DMC1Q14565 340 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 DHCR24Q15392 516 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 FOXD4L6Q3SYB3 417 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 HECTD3Q5T447 861 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 NAIF1Q69YI7 327 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 RHBDF2Q6PJF5 856 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 FOXD4L3Q6VB84 417 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 LRRC69Q6ZNQ3 347 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 CLEC20AQ6ZU45 233 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 HTR3DQ70Z44 454 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 FILIP1Q7Z7B0 1213 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 ACOT1Q86TX2 421 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 C11orf74Q86VG3 221 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 ZC3H3Q8IXZ2 948 aaKnown RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 TTC39CQ8N584 583 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 RPLP0P6Q8NHW5 317 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 SCAMP5Q8TAC9 235 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 CCDC47Q96A33 483 aaKnown RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 CNOT6LQ96LI5 555 aaKnown RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 INSM2Q96T92 566 aaPredicted RBP6.33□□□□□ -1.4
FAM49B-228ENST00000523993 TMEM8AQ9HCN3 771 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 STRIP2Q9ULQ0 834 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 MMP17Q9ULZ9 603 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 SCML2Q9UQR0 700 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 COQ4Q9Y3A0 265 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 STARD13Q9Y3M8 1113 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 CPQQ9Y646 472 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 ADAMTS9Q9P2N4 1935 aa6.33□□□□□ -1.4
FAM49B-228ENST00000523993 PCDH15Q96QU1 1955 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.32□□□□□ -1.4
FAM49B-228ENST00000523993 AXIN1O15169 862 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 KLF4O43474 513 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 MBL2P11226 248 aaPredicted RBP6.32□□□□□ -1.4
FAM49B-228ENST00000523993 EPB42P16452 691 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 TRIM21P19474 475 aaKnown RBP6.32□□□□□ -1.4
FAM49B-228ENST00000523993 PSMC2P35998 433 aaKnown RBP6.32□□□□□ -1.4
FAM49B-228ENST00000523993 GRIA2P42262 883 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 RNF144AP50876 292 aaPredicted RBP6.32□□□□□ -1.4
FAM49B-228ENST00000523993 DGKEP52429 567 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 KIF11P52732 1056 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 TYRO3Q06418 890 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 ADAM9Q13443 819 aa6.32□□□□□ -1.4
FAM49B-228ENST00000523993 CRY1Q16526 586 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms