RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 HES3Q5TGS1 186 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 GPR155Q7Z3F1 870 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 METTL3Q86U44 580 aaKnown RBP12.24□□□□□ -0.45
SDCBP-211ENST00000523441 TMPRSS12Q86WS5 348 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 EID2Q8N6I1 236 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 PDILTQ8N807 584 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 C12orf29Q8N999 325 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 ZMIZ2Q8NF64 920 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 CYB5D2Q8WUJ1 264 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 BAP1Q92560 729 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 ZNF516Q92618 1163 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 IGSF8Q969P0 613 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 SDCBP2Q9H190 292 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 OLFML3Q9NRN5 406 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 HMGXB4Q9UGU5 601 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.24□□□□□ -0.45
SDCBP-211ENST00000523441 NFE2L3Q9Y4A8 694 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 CLIC4Q9Y696 253 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 PTPRQQ9UMZ3 2332 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 TSPAN3O60637 253 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 RFPL3O75679 317 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 STC2O76061 302 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 SEMA4FO95754 770 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 ITGAVP06756 1048 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 CORO1AP31146 461 aaKnown RBP12.23□□□□□ -0.45
SDCBP-211ENST00000523441 PLA2G4AP47712 749 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 EFEMP1Q12805 493 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 ALCAMQ13740 583 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 INAVAQ3KP66 663 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 FYB2Q5VWT5 728 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 ANKS1BQ7Z6G8 1248 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 DENND1CQ8IV53 801 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 CCDC65Q8IXS2 484 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 DDI1Q8WTU0 396 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 SLC6A18Q96N87 628 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 FBXO44Q9H4M3 255 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 ELOVL2Q9NXB9 296 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 IL37Q9NZH6 218 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 HECTD1Q9ULT8 2610 aa12.23□□□□□ -0.45
SDCBP-211ENST00000523441 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
SDCBP-211ENST00000523441 BRINP1O60477 761 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 BMP15O95972 392 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 KLKB1P03952 638 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 CTSKP43235 329 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 GRIA4P48058 902 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 NDST1P52848 882 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 CYP24A1Q07973 514 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 LY6DQ14210 128 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 STXBP4Q6ZWJ1 553 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 OR2T3Q8NH03 318 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 SYAP1Q96A49 352 aaPredicted RBP12.22□□□□□ -0.45
SDCBP-211ENST00000523441 LGMNQ99538 433 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 BTBD1Q9H0C5 482 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 MTG2Q9H4K7 406 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 SMC3Q9UQE7 1217 aa12.22□□□□□ -0.45
SDCBP-211ENST00000523441 MGAQ8IWI9 3026 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 A0A087X0B3 334 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.45
SDCBP-211ENST00000523441 DNTTP04053 509 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 CYBBP04839 570 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 FAM200BP0CF97 657 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 CD27P26842 260 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 HOXD13P35453 343 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 BCAT1P54687 386 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 PSMD6Q15008 389 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 ARHGAP40Q5TG30 622 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 TMEM215Q68D42 235 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 FAM173BQ6P4H8 233 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 PCSK4Q6UW60 755 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 KDM7AQ6ZMT4 941 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 Q6ZNB5 142 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 FAM181AQ8N9Y4 354 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 ACE2Q9BYF1 805 aaPredicted RBP12.21□□□□□ -0.45
SDCBP-211ENST00000523441 XYLT2Q9H1B5 865 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 CPNE5Q9HCH3 593 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 KIAA1586Q9HCI6 787 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 CYLDQ9NQC7 956 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 AGPAT3Q9NRZ7 376 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.21□□□□□ -0.45
SDCBP-211ENST00000523441 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 FBXO2Q9UK22 296 aaPredicted RBP12.21□□□□□ -0.45
SDCBP-211ENST00000523441 SLC27A6Q9Y2P4 619 aa12.21□□□□□ -0.45
SDCBP-211ENST00000523441 KNTC1P50748 2209 aa12.21□□□□□ -0.46
SDCBP-211ENST00000523441 TEX51A0A1B0GUA7 166 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 FAM92AA1XBS5 289 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 E9PAM4 449 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 PCDHGA12O60330 932 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 PENKP01210 267 aaPredicted RBP12.2□□□□□ -0.46
SDCBP-211ENST00000523441 IGLV3-19P01714 112 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 RPS14P62263 151 aaKnown RBP12.2□□□□□ -0.46
SDCBP-211ENST00000523441 TLE3Q04726 772 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 SPOPLQ6IQ16 392 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 CCDC73Q6ZRK6 1079 aa12.2□□□□□ -0.46
SDCBP-211ENST00000523441 CHST9Q7L1S5 443 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms