RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
PCDHGB1-201ENST00000523390 CCT8L1PA6NM43 557 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 NCAM2O15394 837 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 PGM1P36871 562 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 SCNN1BP51168 640 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 LBRQ14739 615 aaKnown RBP13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 NETO2Q8NC67 525 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 N4BP2L2Q92802 583 aaPredicted RBP13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 PWWP2AQ96N64 755 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 SERPINB11Q96P15 392 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 VCX3AQ9NNX9 186 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 SLC24A2Q9UI40 661 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 AJAP1Q9UKB5 411 aaPredicted RBP13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 LOC100653049A0A140TA62 436 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 CFAP73A6NFT4 308 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 SCAMP3O14828 347 aaKnown RBP13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 TSPAN1O60635 241 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 TSPAN3O60637 253 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 MSCO60682 206 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 RAMP2O60895 175 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 KRT34O76011 436 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 HSPA8P11142 646 aaKnown RBP13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 CPA2P48052 419 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 C9orf57Q5W0N0 161 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 PKP3Q9Y446 797 aa13.46□□□□□ -0.25
PCDHGB1-201ENST00000523390 PYGLP06737 847 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 MGAT1P26572 445 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 HNRNPH1P31943 449 aaKnown RBP13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 EPHB3P54753 998 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 JAM2P57087 298 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 MBTD1Q05BQ5 628 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 DPYSL3Q14195 570 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 SDHAF4Q5VUM1 108 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 FAM53CQ9NYF3 392 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 PHTF1Q9UMS5 762 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 COG5Q9UP83 839 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 RPTORQ8N122 1335 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 SUPT3HB4E1H0 165 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 SUPT3HO75486 399 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 MYL4P12829 197 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 MPP3Q13368 585 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 SNX19Q92543 992 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 NCLNQ969V3 563 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 SIX2Q9NPC8 291 aa13.46□□□□□ -0.26
PCDHGB1-201ENST00000523390 PKD1L3Q7Z443 1732 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 TMEM191CA6NGB0 347 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 NOMO2Q5JPE7 1267 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 MYLPFQ96A32 169 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 MRPL9Q9BYD2 267 aaKnown RBP13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 APOBEC3GQ9HC16 384 aaKnown RBP13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 OR12D3Q9UGF7 316 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 ADGRA3Q8IWK6 1321 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 CHUKO15111 745 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 LIASO43766 372 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 OR1E1P30953 314 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 RGS9BPQ6ZS82 235 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 ILDR2Q71H61 639 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 RNF157Q96PX1 679 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 PCYOX1Q9UHG3 505 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 CRLS1Q9UJA2 301 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 ASGR1P07306 291 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 WEE1P30291 646 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 HMOX2P30519 316 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 MGAT5Q09328 741 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 ARHGAP15Q53QZ3 475 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 ANKRD20A8PQ5CZ79 823 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 MRNIPQ6NTE8 343 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 SLC26A7Q8TE54 656 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 UNKQ9C0B0 810 aaKnown RBP13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 ERVK-5Q9HDB9 667 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 CDH9Q9ULB4 789 aa13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
PCDHGB1-201ENST00000523390 TMEM88BA6NKF7 163 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 NT5C1B-RDH14C9J2C7 533 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 FSCN2O14926 492 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 GLRA3O75311 464 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 PIAS1O75925 651 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 LUC7L3O95232 432 aaKnown RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 RPL22P35268 128 aaKnown RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 NR2C2P49116 596 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 FSTL1Q12841 308 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 PKN2Q16513 984 aaKnown RBP13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 BBS12Q6ZW61 710 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 SH3KBP1Q96B97 665 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 APOL5Q9BWW9 433 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 CD274Q9NZQ7 290 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 MARCH2Q9P0N8 246 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 CTNNAL1Q9UBT7 734 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 PCDHB12Q9Y5F1 795 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 hCG_1818297A0A087WSY0 165 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 SPTLC1O15269 473 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 TIMM44O43615 452 aa13.44□□□□□ -0.26
PCDHGB1-201ENST00000523390 C22orf31O95567 290 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms