RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SCUBE3Q8IX30 993 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 PGBD3Q8N328 593 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 CPXM2Q8N436 756 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 ZNF606Q8WXB4 792 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 IRGQQ8WZA9 623 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 CD248Q9HCU0 757 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 LMBRD1Q9NUN5 540 aa19.52■□□□□ 0.72
SPIDR-220ENST00000522900 BCCIPQ9P287 314 aaKnown RBP eCLIP19.52■□□□□ 0.72
SPIDR-220ENST00000522900 AJAP1Q9UKB5 411 aaPredicted RBP19.52■□□□□ 0.72
SPIDR-220ENST00000522900 HBS1LQ9Y450 684 aaKnown RBP19.52■□□□□ 0.72
SPIDR-220ENST00000522900 MED19A0JLT2 244 aaPredicted RBP19.51■□□□□ 0.71
SPIDR-220ENST00000522900 DCDC2BA2VCK2 349 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 LTFP02788 710 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 GABRG2P18507 467 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 PON1P27169 355 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 RPL34P49207 117 aaKnown RBP19.51■□□□□ 0.71
SPIDR-220ENST00000522900 HARS2P49590 506 aaKnown RBP19.51■□□□□ 0.71
SPIDR-220ENST00000522900 MFAP3P55082 362 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 HSP90AA4PQ58FG1 418 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 PMS2CLQ68D20 193 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 MSANTD2Q6P1R3 559 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 TRMT11Q7Z4G4 463 aaKnown RBP19.51■□□□□ 0.71
SPIDR-220ENST00000522900 CHPFQ8IZ52 775 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 DDI1Q8WTU0 396 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 PIWIL1Q96J94 861 aaKnown RBP19.51■□□□□ 0.71
SPIDR-220ENST00000522900 CACNA2D2Q9NY47 1150 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 CYTH4Q9UIA0 394 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 MBD1Q9UIS9 605 aaPredicted RBP19.51■□□□□ 0.71
SPIDR-220ENST00000522900 SLC27A6Q9Y2P4 619 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 PCDHGA5Q9Y5G8 931 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 RAD54BQ9Y620 910 aa19.51■□□□□ 0.71
SPIDR-220ENST00000522900 BCLAF3A2AJT9 711 aaKnown RBP19.5■□□□□ 0.71
SPIDR-220ENST00000522900 SDHBP21912 280 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 USP8P40818 1118 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 CREB5Q02930 508 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 TPD52L1Q16890 204 aaPredicted RBP19.5■□□□□ 0.71
SPIDR-220ENST00000522900 EXOC3L4Q17RC7 722 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 MAP7D1Q3KQU3 841 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 TCEAL6Q6IPX3 200 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 ENOSF1Q7L5Y1 443 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 TCEAL3Q969E4 200 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 GABRG3Q99928 467 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 NUP62CLQ9H1M0 184 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 THAP9Q9H5L6 903 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 SIX2Q9NPC8 291 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 ST7Q9NRC1 585 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 APEX2Q9UBZ4 518 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 CEP250Q9BV73 2442 aa19.5■□□□□ 0.71
SPIDR-220ENST00000522900 SDK1Q7Z5N4 2213 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 GOLGA6L7A0A1B0GV03 622 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 GFRA2O00451 464 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 THAP12O43422 761 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 FBXO21O94952 628 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 IGLV3-27P01718 113 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 CYBBP04839 570 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 SGSHP51688 502 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 FOXK2Q01167 660 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 SDE2Q6IQ49 451 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 NETO1Q8TDF5 533 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 IPO4Q8TEX9 1081 aaKnown RBP19.49■□□□□ 0.71
SPIDR-220ENST00000522900 RTKNQ9BST9 563 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 SLC4A5Q9BY07 1137 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 SLC6A17Q9H1V8 727 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 STOML2Q9UJZ1 356 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 NAALADL1Q9UQQ1 740 aa19.49■□□□□ 0.71
SPIDR-220ENST00000522900 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 GTPBP10A4D1E9 387 aaKnown RBP19.48■□□□□ 0.71
SPIDR-220ENST00000522900 SLC30A4O14863 429 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 MED7O43513 233 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 CAVIN2O95810 425 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 NCAM1P13591 858 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 HOXD9P28356 352 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-220ENST00000522900 ERCC5P28715 1186 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-220ENST00000522900 GNA15P30679 374 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 DHPSP49366 369 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-220ENST00000522900 AASDHQ4L235 1098 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-220ENST00000522900 MPPE1Q53F39 396 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 MIIPQ5JXC2 388 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 ADGRF1Q5T601 910 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 TMEM215Q68D42 235 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 DPY19L2P1Q6NXN4 242 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 TMEFF1Q8IYR6 380 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 WDTC1Q8N5D0 677 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 C12orf50Q8NA57 414 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-220ENST00000522900 SORCS1Q8WY21 1168 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 TMA16Q96EY4 203 aaKnown RBP19.48■□□□□ 0.71
SPIDR-220ENST00000522900 VPS45Q9NRW7 570 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 CALCOCO1Q9P1Z2 691 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 TJP2Q9UDY2 1190 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 STON1Q9Y6Q2 735 aa19.48■□□□□ 0.71
SPIDR-220ENST00000522900 E5RJQ4 531 aa19.47■□□□□ 0.71
SPIDR-220ENST00000522900 PAPSS1O43252 624 aaPredicted RBP19.47■□□□□ 0.71
SPIDR-220ENST00000522900 MAP3K13O43283 966 aa19.47■□□□□ 0.71
SPIDR-220ENST00000522900 NDUFV2P19404 249 aa19.47■□□□□ 0.71
SPIDR-220ENST00000522900 ACADSBP45954 432 aa19.47■□□□□ 0.71
SPIDR-220ENST00000522900 TBX4P57082 545 aa19.47■□□□□ 0.71
SPIDR-220ENST00000522900 MAN2A1Q16706 1144 aa19.47■□□□□ 0.71
SPIDR-220ENST00000522900 SYPL2Q5VXT5 272 aa19.47■□□□□ 0.71
SPIDR-220ENST00000522900 RFWD3Q6PCD5 774 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms