RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GFRA2O00451 464 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 HNRNPLP14866 589 aaKnown RBP eCLIP18.61■□□□□ 0.57
CLK4-211ENST00000522556 SLC6A4P31645 630 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 EIF2DP41214 584 aaKnown RBP18.61■□□□□ 0.57
CLK4-211ENST00000522556 FNTBP49356 437 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 MRE11P49959 708 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 TBX4P57082 545 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 ARID5AQ03989 594 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 SRSF5Q13243 272 aaKnown RBP18.61■□□□□ 0.57
CLK4-211ENST00000522556 OTUD1Q5VV17 481 aaPredicted RBP18.61■□□□□ 0.57
CLK4-211ENST00000522556 MAMSTRQ6ZN01 415 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 DEFB106AQ8N104 65 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 OLIG1Q8TAK6 271 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 CPA5Q8WXQ8 436 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 GOLGA1Q92805 767 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 HHIPQ96QV1 700 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 PCDHB18PQ96TA0 734 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 CALCOCO1Q9P1Z2 691 aa18.61■□□□□ 0.57
CLK4-211ENST00000522556 PRRT4C9JH25 899 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 SART1O43290 800 aaKnown RBP18.6■□□□□ 0.57
CLK4-211ENST00000522556 PENKP01210 267 aaPredicted RBP18.6■□□□□ 0.57
CLK4-211ENST00000522556 IGLV3-25P01717 112 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 APODP05090 189 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 TFE3P19532 575 aaPredicted RBP18.6■□□□□ 0.57
CLK4-211ENST00000522556 PTMSP20962 102 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 TIE1P35590 1138 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 KIR2DL1P43626 348 aaPredicted RBP18.6■□□□□ 0.57
CLK4-211ENST00000522556 YWHAZP63104 245 aaKnown RBP18.6■□□□□ 0.57
CLK4-211ENST00000522556 ZNF528Q3MIS6 628 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 FAM133BQ5BKY9 247 aaKnown RBP18.6■□□□□ 0.57
CLK4-211ENST00000522556 E4F1Q66K89 784 aaPredicted RBP18.6■□□□□ 0.57
CLK4-211ENST00000522556 TRNP1Q6NT89 227 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 RFWD3Q6PCD5 774 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 CPXM2Q8N436 756 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 ALLCQ8N6M5 410 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 TERB1Q8NA31 727 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 ZBTB44Q8NCP5 570 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 TMEM35BQ8NCS4 154 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 BAP1Q92560 729 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 SLC39A13Q96H72 371 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 SLC2A13Q96QE2 648 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 DCLK3Q9C098 648 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 POPDC2Q9HBU9 364 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 DEC1Q9P2X7 70 aa18.6■□□□□ 0.57
CLK4-211ENST00000522556 SYNJ2BP-COX16A0A087WUM0 186 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 IRAK2O43187 625 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 PAPSS2O95340 614 aaPredicted RBP18.59■□□□□ 0.57
CLK4-211ENST00000522556 TRUB2O95900 331 aaKnown RBP18.59■□□□□ 0.57
CLK4-211ENST00000522556 CISD3P0C7P0 127 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 STAT1P42224 750 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 GRIA2P42262 883 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 HARS2P49590 506 aaKnown RBP18.59■□□□□ 0.57
CLK4-211ENST00000522556 CDR2Q01850 454 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 FBXO43Q4G163 708 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 DCAF6Q58WW2 860 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 C10orf76Q5T2E6 689 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 SMYD5Q6GMV2 418 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 GRAMD4Q6IC98 578 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 PHLDB2Q86SQ0 1253 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 XYLT1Q86Y38 959 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 SLC30A5Q8TAD4 765 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 WFDC5Q8TCV5 224 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 IPO4Q8TEX9 1081 aaKnown RBP18.59■□□□□ 0.57
CLK4-211ENST00000522556 ERLEC1Q96DZ1 483 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 PRICKLE1Q96MT3 831 aaPredicted RBP18.59■□□□□ 0.57
CLK4-211ENST00000522556 IRF2BPLQ9H1B7 796 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 ZSCAN32Q9NX65 697 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 COX16Q9P0S2 106 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 ZNF510Q9Y2H8 683 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 CEP83Q9Y592 693 aa18.59■□□□□ 0.57
CLK4-211ENST00000522556 PRR23AA6NEV1 266 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 PROB1E7EW31 1015 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 CAPN9O14815 690 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 KLF8O95600 359 aaPredicted RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 MOCS2O96007 188 aaPredicted RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 CYP1A1P04798 512 aaPredicted RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 HOXD9P28356 352 aaPredicted RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 FANCCQ00597 558 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 SLC6A3Q01959 620 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 EIF4EBP2Q13542 120 aaPredicted RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 DMC1Q14565 340 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 ZC3H12AQ5D1E8 599 aaKnown RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 EGFLAMQ63HQ2 1017 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 TMEM92Q6UXU6 159 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 MMS22LQ6ZRQ5 1243 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 SLC26A9Q7LBE3 791 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 IL17RCQ8NAC3 791 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 TXNDC5Q8NBS9 432 aaKnown RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 SERPINB11Q96P15 392 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 NOX5Q96PH1 765 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 ACOX2Q99424 681 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 NUCKS1Q9H1E3 243 aaKnown RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 SYNCQ9H7C4 482 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 WDR35Q9P2L0 1181 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 STOML2Q9UJZ1 356 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 TLR6Q9Y2C9 796 aa18.58■□□□□ 0.56
CLK4-211ENST00000522556 MUC22E2RYF6 1773 aaPredicted RBP18.58■□□□□ 0.56
CLK4-211ENST00000522556 DMDP11532 3685 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms