RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 THAP1Q9NVV9 213 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CCL15-CCL14A0A0B4J2E2 113 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 VWA5AO00534 786 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 PSMA4P25789 261 aaKnown RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 NDST1P52848 882 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 KRT72Q14CN4 511 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 SNX17Q15036 470 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 CCL15Q16663 113 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 GNASQ5JWF2 1037 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 LRRC38Q5VT99 294 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 OLFML2BQ68BL8 750 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 LRRC74BQ6ZQY2 392 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ADGRF2Q8IZF7 708 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 GPR63Q9BZJ6 419 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 BAZ2AQ9UIF9 1905 aaKnown RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 APOC4-APOC2K7ER74 178 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ZSCAN9O15535 394 aaPredicted RBP14.2□□□□□ -0.14
SYNPO-205ENST00000522122 APOC2P02655 101 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 SERPINE1P05121 402 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 TSHRP16473 764 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 GP5P40197 560 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ITGA9Q13797 1035 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ACAP1Q15027 740 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ZRANB3Q5FWF4 1079 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 C10orf120Q5SQS8 335 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 DEFB107AQ8IZN7 70 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 BLOC1S5Q8TDH9 187 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ECSITQ9BQ95 431 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 ASB7Q9H672 318 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 NR2E1Q9Y466 385 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 V9GYQ6 96 aa14.2□□□□□ -0.14
SYNPO-205ENST00000522122 NCAM2O15394 837 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 PRPF4O43172 522 aaKnown RBP eCLIP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 FBXO21O94952 628 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 CYBBP04839 570 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ODC1P11926 461 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ATP4AP20648 1035 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 MIPP30301 263 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 DSG3P32926 999 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 FAAP100Q0VG06 881 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 DMC1Q14565 340 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 DACT2Q5SW24 774 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 TRABD2AQ86V40 505 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 PALB2Q86YC2 1186 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ZSWIM2Q8NEG5 633 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 LZICQ8WZA0 190 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 IKZF4Q9H2S9 585 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 MMADHCQ9H3L0 296 aaPredicted RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ITGA11Q9UKX5 1188 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 FAM32AQ9Y421 112 aaKnown RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 SNX13Q9Y5W8 968 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 PSMC3P17980 439 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 AKT1P31749 480 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 OR1G1P47890 313 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 CDH8P55286 799 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 FAM162AQ96A26 154 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 RBBP8Q99708 897 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 KLHL4Q9C0H6 718 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 MROH8Q9H579 483 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 CYP4F12Q9HCS2 524 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 TEKT2Q9UIF3 430 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 LSM7Q9UK45 103 aaKnown RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 PLCH1Q4KWH8 1693 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 MYO1GB0I1T2 1018 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ACKR2O00590 384 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ZSCAN5DPP0CG00 497 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 HOXD10P28358 340 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 FBXO47Q5MNV8 452 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ADCK1Q86TW2 530 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ATP6V0D2Q8N8Y2 350 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 RPRD1AQ96P16 312 aaPredicted RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ABI2Q9NYB9 513 aaPredicted RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 VANGL2Q9ULK5 521 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 TCRBV7S2A1N4TA0A589 114 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 NKRFO15226 690 aaKnown RBP eCLIP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 HNRNPRO43390 633 aaKnown RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 PSMG1O95456 288 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 RBP1P09455 135 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 CETPP11597 493 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 PTK2BQ14289 1009 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 ADRM1Q16186 407 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 TIGD7Q6NT04 549 aaPredicted RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 PHF13Q86YI8 300 aaPredicted RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 KREMEN1Q96MU8 473 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 TBC1D10AQ9BXI6 508 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 TRIM45Q9H8W5 580 aaPredicted RBP14.19□□□□□ -0.14
SYNPO-205ENST00000522122 TCF7L2Q9NQB0 619 aa14.19□□□□□ -0.14
SYNPO-205ENST00000522122 MMP14P50281 582 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 NEK2P51955 445 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 ERO1BQ86YB8 467 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 ZNF786Q8N393 782 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 TDRD5Q8NAT2 981 aaKnown RBP14.18□□□□□ -0.14
SYNPO-205ENST00000522122 SLC16A10Q8TF71 515 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 SIKE1Q9BRV8 207 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 C17orf80Q9BSJ5 609 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 MAGEB16A2A368 324 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 EVPLLA8MZ36 301 aa14.18□□□□□ -0.14
SYNPO-205ENST00000522122 DPYSL4O14531 572 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms