RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 KCNT2Q6UVM3 1135 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 BZW1Q7L1Q6 419 aaKnown RBP19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 PDIK1LQ8N165 341 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 DBF4BQ8NFT6 615 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 RNF208Q9H0X6 261 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 VPS37BQ9H9H4 285 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 RAB6BQ9NRW1 208 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 DDIT4Q9NX09 232 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 DNAJB4Q9UDY4 337 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 LGALS13Q9UHV8 139 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 PRG3Q9Y2Y8 225 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 SRRM3A6NNA2 597 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 ENPP3O14638 875 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 BANF1O75531 89 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 F9P00740 461 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 C1QTNF8P60827 252 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 PPARDQ03181 441 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 MSS51Q4VC12 460 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 PLEKHG4Q58EX7 1191 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 C4orf22Q6V702 233 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 ANKMY2Q8IV38 441 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 BCAS4Q8TDM0 211 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 PYROXD1Q8WU10 500 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 LRRN4Q8WUT4 740 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 EDEM1Q92611 657 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 OLFM3Q96PB7 478 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 SELENOSQ9BQE4 189 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 CTNNAL1Q9UBT7 734 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 FBXW11Q9UKB1 542 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 MFHAS1Q9Y4C4 1052 aa19.13■□□□□ 0.65
TRAPPC9-210ENST00000521667 E7EVH7 732 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 TRAPPC3O43617 180 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 CREB3O43889 395 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 OAZ2O95190 189 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 CCDC38Q502W7 563 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 BSPRYQ5W0U4 402 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 PPP1R21Q6ZMI0 780 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 EXOC3L1Q86VI1 746 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 ABI1Q8IZP0 508 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 ARHGEF2Q92974 986 aaKnown RBP19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 TRIM62Q9BVG3 475 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 KLC2Q9H0B6 622 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 EPN3Q9H201 632 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.12■□□□□ 0.651e-6■■■■□ 26.4
TRAPPC9-210ENST00000521667 ZMYND8Q9ULU4 1186 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 EXOC1LA0A1B0GW35 172 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 HACD1B0YJ81 288 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 EEF2KO00418 725 aaKnown RBP19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 DGKIO75912 1065 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 ARL13BQ3SXY8 428 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 RFX8Q6ZV50 586 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 RIBC1Q8N443 379 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 CCDC110Q8TBZ0 833 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 MDM1Q8TC05 714 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 COLEC11Q9BWP8 271 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 PCDHB7Q9Y5E2 793 aa19.12■□□□□ 0.65
TRAPPC9-210ENST00000521667 SF3B1O75533 1304 aaKnown RBP eCLIP19.12■□□□□ 0.652e-6■■■■■ 136.7
TRAPPC9-210ENST00000521667 PITPNM1O00562 1244 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 MFSD11O43934 449 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 TADA2AO75478 443 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 GCATO75600 419 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 OR4Q2P0C623 313 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 GRIK1P39086 918 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 GPX6P59796 221 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 DPYSQ14117 519 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 BBS9Q3SYG4 887 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 SLC39A12Q504Y0 691 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 HEATR6Q6AI08 1181 aaKnown RBP19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 CAPN12Q6ZSI9 719 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 BEND5Q7L4P6 421 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 DCP1BQ8IZD4 617 aaKnown RBP19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 CCDC33Q8N5R6 958 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 DNAJC5GQ8N7S2 189 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 ATP11CQ8NB49 1132 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 FBXO36Q8NEA4 188 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 SCAMP5Q8TAC9 235 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 TFB1MQ8WVM0 346 aaKnown RBP19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 SEPT8Q92599 483 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 ZCWPW1Q9H0M4 648 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 RABEP2Q9H5N1 569 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 ANLNQ9NQW6 1124 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 EURLQ9NYK6 297 aa19.11■□□□□ 0.65
TRAPPC9-210ENST00000521667 CLUHO75153 1309 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 C5orf60A6NFR6 353 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 PHBP35232 272 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 MAGEA6P43360 314 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 CXCR3P49682 368 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 HNRNPH2P55795 449 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 SEMA3BQ13214 749 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 CENPTQ96BT3 561 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 WDR83Q9BRX9 315 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 FRMD8Q9BZ67 464 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 COL4A4P53420 1690 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 I6L893 689 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 SYN3O14994 580 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 CHN1P15882 459 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 SLC5A3P53794 718 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 PAFAH1B3Q15102 231 aaKnown RBP19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAM182AQ5T1J6 154 aa19.1■□□□□ 0.65
TRAPPC9-210ENST00000521667 FAM43BQ6ZT52 329 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms