RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 LRRC4Q9HBW1 653 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 HESX1Q9UBX0 185 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 SLC6A14Q9UN76 642 aa20.57■□□□□ 0.88
PABPC1-215ENST00000520804 CACNA1BQ00975 2339 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 NPC1O15118 1278 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 CFIP05156 583 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 VDRP11473 427 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 CD19P15391 556 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 BST2Q10589 180 aaKnown RBP20.56■□□□□ 0.88
PABPC1-215ENST00000520804 ENPP2Q13822 863 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 TRIP4Q15650 581 aaPredicted RBP20.56■□□□□ 0.88
PABPC1-215ENST00000520804 SLC41A1Q8IVJ1 513 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 UBR7Q8N806 425 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 PIWIL1Q96J94 861 aaKnown RBP20.56■□□□□ 0.88
PABPC1-215ENST00000520804 TIGD1Q96MW7 591 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 CD93Q9NPY3 652 aa20.56■□□□□ 0.88
PABPC1-215ENST00000520804 OLA1Q9NTK5 396 aaKnown RBP20.56■□□□□ 0.88
PABPC1-215ENST00000520804 THAP10Q9P2Z0 257 aaPredicted RBP20.56■□□□□ 0.88
PABPC1-215ENST00000520804 O00370 1275 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 SERPINF2P08697 491 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 TBXAS1P24557 533 aaPredicted RBP20.55■□□□□ 0.88
PABPC1-215ENST00000520804 IL12RB1P42701 662 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 ZNF132P52740 706 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 ADIGQ0VDE8 80 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 LRMPQ12912 555 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 STARD3Q14849 445 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 FUT11Q495W5 492 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 KIAA1324Q6UXG2 1013 aaKnown RBP20.55■□□□□ 0.88
PABPC1-215ENST00000520804 ANKS1BQ7Z6G8 1248 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 RABEPKQ7Z6M1 372 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 TRIML1Q8N9V2 468 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 UBA3Q8TBC4 463 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 DDI1Q8WTU0 396 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 UCMAQ8WVF2 138 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 KCTD13Q8WZ19 329 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 ZNF419Q96HQ0 510 aaPredicted RBP20.55■□□□□ 0.88
PABPC1-215ENST00000520804 HSPA12BQ96MM6 686 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 IPO9Q96P70 1041 aaKnown RBP20.55■□□□□ 0.88
PABPC1-215ENST00000520804 SLC2A11Q9BYW1 496 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 CAPN10Q9HC96 672 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 METTL14Q9HCE5 456 aaKnown RBP20.55■□□□□ 0.88
PABPC1-215ENST00000520804 FSCN3Q9NQT6 498 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 HOOK1Q9UJC3 728 aaKnown RBP20.55■□□□□ 0.88
PABPC1-215ENST00000520804 KIAA1257Q9ULG3 409 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 CLEC4EQ9ULY5 219 aa20.55■□□□□ 0.88
PABPC1-215ENST00000520804 MAP1BP46821 2468 aaKnown RBP20.54■□□□□ 0.88
PABPC1-215ENST00000520804 PI4KAP42356 2102 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 CHD8Q9HCK8 2581 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 PSMA7O14818 248 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 SETSIPP0DME0 302 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 FMO5P49326 533 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 GFPT1Q06210 699 aaPredicted RBP20.54■□□□□ 0.88
PABPC1-215ENST00000520804 EIF4HQ15056 248 aaKnown RBP20.54■□□□□ 0.88
PABPC1-215ENST00000520804 PKDCCQ504Y2 493 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 BSPRYQ5W0U4 402 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 METTL3Q86U44 580 aaKnown RBP20.54■□□□□ 0.88
PABPC1-215ENST00000520804 FMNL3Q8IVF7 1028 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 SIX6OS1Q8N1H7 587 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 DEFB124Q8NES8 71 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 RNF139Q8WU17 664 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 DHTKD1Q96HY7 919 aaPredicted RBP20.54■□□□□ 0.88
PABPC1-215ENST00000520804 ELOVL2Q9NXB9 296 aa20.54■□□□□ 0.88
PABPC1-215ENST00000520804 HBS1LQ9Y450 684 aaKnown RBP20.54■□□□□ 0.88
PABPC1-215ENST00000520804 GON4LQ3T8J9 2241 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 YJEFN3A6XGL0 299 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 E7ENQ6 273 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 NDUFS2O75306 463 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 HARS2P49590 506 aaKnown RBP20.53■□□□□ 0.88
PABPC1-215ENST00000520804 ATXN3P54252 364 aaPredicted RBP20.53■□□□□ 0.88
PABPC1-215ENST00000520804 NUCB2P80303 420 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 FOXC1Q12948 553 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 STIM1Q13586 685 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 E2F5Q15329 346 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 LCLAT1Q6UWP7 414 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 RBBP8NLQ8NC74 664 aaPredicted RBP20.53■□□□□ 0.88
PABPC1-215ENST00000520804 EDEM1Q92611 657 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 CEP63Q96MT8 703 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 GTPBP2Q9BX10 602 aaKnown RBP20.53■□□□□ 0.88
PABPC1-215ENST00000520804 PRDM16Q9HAZ2 1276 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 CNGB3Q9NQW8 809 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 SFMBT1Q9UHJ3 866 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 WASF3Q9UPY6 502 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 PCDH15Q96QU1 1955 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 ADAMTS9Q9P2N4 1935 aa20.53■□□□□ 0.88
PABPC1-215ENST00000520804 ASCC3Q8N3C0 2202 aaKnown RBP20.52■□□□□ 0.88
PABPC1-215ENST00000520804 PMM2O15305 246 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 PAEPP09466 180 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 CD44P16070 742 aaKnown RBP20.52■□□□□ 0.88
PABPC1-215ENST00000520804 CD6P30203 668 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 SEMA3BQ13214 749 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 BECN1Q14457 450 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 ZNF234Q14588 700 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 MPPE1Q53F39 396 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 ISM2Q6H9L7 571 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 TMEM270Q6UE05 265 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 ELOA2Q8IYF1 753 aaPredicted RBP20.52■□□□□ 0.88
PABPC1-215ENST00000520804 SCML4Q8N228 414 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 TFAP2BQ92481 460 aa20.52■□□□□ 0.88
PABPC1-215ENST00000520804 FOXJ1Q92949 421 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms