RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 STK35Q8TDR2 534 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 RSPH1Q8WYR4 309 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 ZNF653Q96CK0 615 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 NAPGQ99747 312 aaPredicted RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 C11orf70Q9BRQ4 267 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 NUP85Q9BW27 656 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 TLR10Q9BXR5 811 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 GOLPH3Q9H4A6 298 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 L2HGDHQ9H9P8 463 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 PRDM5Q9NQX1 630 aaPredicted RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 ADAM22Q9P0K1 906 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 CNOT8Q9UFF9 292 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 SLC5A6Q9Y289 635 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 JRKLQ9Y4A0 524 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 RNF114Q9Y508 228 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 TIMM13Q9Y5L4 95 aaPredicted RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 ARID1BQ8NFD5 2236 aaPredicted RBP8.27□□□□□ -1.08
CTHRC1-203ENST00000520337 TBKBP1A7MCY6 615 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 M0QYV0 167 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 ENC1O14682 589 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 DGKIO75912 1065 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 GALTP07902 379 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 ACRP10323 421 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 ODC1P11926 461 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 CCDC130P13994 396 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 TYMPP19971 482 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 ACAT1P24752 427 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 TKTP29401 623 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 LHX1P48742 406 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 SLC11A1P49279 550 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 NAP1L1P55209 391 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 RNASELQ05823 741 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 STILQ15468 1287 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 IFI16Q16666 785 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 CCDC142Q17RM4 750 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 PTPN20Q4JDL3 420 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 MEI1Q5TIA1 1274 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 PLEKHA7Q6IQ23 1121 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 PPP1R2P3Q6NXS1 205 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 PAQR9Q6ZVX9 377 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 PHLDB2Q86SQ0 1253 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 ERICH1Q86X53 443 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 FUKQ8N0W3 1084 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 TMEM199Q8N511 208 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 B3GALNT2Q8NCR0 500 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 GPBAR1Q8TDU6 330 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 HASPINQ8TF76 798 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 BCL7CQ8WUZ0 217 aaPredicted RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 SLC35F5Q8WV83 523 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 TOP1MTQ969P6 601 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 CPXM1Q96SM3 734 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 PKMYT1Q99640 499 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 HNRNPABQ99729 332 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 B3GNT5Q9BYG0 378 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 IL23AQ9NPF7 189 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 CRTAC1Q9NQ79 661 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 FAM49BQ9NUQ9 324 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 MARCH5Q9NX47 278 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 DDX43Q9NXZ2 648 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 CTTNBP2NLQ9P2B4 639 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 UVRAGQ9P2Y5 699 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 TJP2Q9UDY2 1190 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 TSPAN16Q9UKR8 245 aa8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 MKI67P46013 3256 aaKnown RBP8.27□□□□□ -1.09
CTHRC1-203ENST00000520337 GBF1Q92538 1859 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 MYBPHLA2RUH7 354 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 TULP2O00295 520 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 NRP1O14786 923 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 NCK2O43639 380 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 URI1O94763 535 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 OAZ2O95190 189 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 FTCDO95954 541 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 EFEMP2O95967 443 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ERBB2P04626 1255 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ALDH2P05091 517 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 CALB1P05937 261 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 SETSIPP0DME0 302 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 PRLRP16471 622 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 GABRB2P47870 512 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 OR1G1P47890 313 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 RPL34P49207 117 aaKnown RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 GSCP56915 257 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 WDR5P61964 334 aaKnown RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 PSMC1P62191 440 aaKnown RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 DEFB103AP81534 67 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 PDCLQ13371 301 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 LRRC14Q15048 493 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 CYP4A22Q5TCH4 519 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 LIN9Q5TKA1 542 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 PMF1Q6P1K2 205 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 FAM171BQ6P995 826 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 TMCO2Q7Z6W1 182 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 NT5DC3Q86UY8 548 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 LRRTM3Q86VH5 581 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 CPNE8Q86YQ8 564 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ANKRD52Q8NB46 1076 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 OR10T2Q8NGX3 314 aa8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 ZNF564Q8TBZ8 553 aaPredicted RBP8.26□□□□□ -1.09
CTHRC1-203ENST00000520337 SLC2A14Q8TDB8 520 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms