RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 H3BNC9 293 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 CTIFO43310 598 aaKnown RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 ASNA1O43681 348 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 TAF5LO75529 589 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 TCEA3O75764 348 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 EIF3JO75822 258 aaKnown RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 C1RP00736 705 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 ITGA2BP08514 1039 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 APEHP13798 732 aaKnown RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 MATN1P21941 496 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 PTH2RP49190 550 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 RENBPP51606 427 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 GPC5P78333 572 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 GALNT1Q10472 559 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 BFSP2Q13515 415 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 TRIM14Q14142 442 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 P3H1Q32P28 736 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 ATPAF1Q5TC12 328 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 VSTM1Q6UX27 236 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 SERPINA13PQ6UXR4 307 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 RINLQ6ZS11 566 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 PIK3AP1Q6ZUJ8 805 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 CACNA2D3Q8IZS8 1091 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 ATG16L2Q8NAA4 619 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 HASPINQ8TF76 798 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 STYXQ8WUJ0 223 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 PSMD1Q99460 953 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 MACROD1Q9BQ69 325 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 KATNAL1Q9BW62 490 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 RNF26Q9BY78 433 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 R3HDMLQ9H3Y0 253 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 USP29Q9HBJ7 922 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 AGO4Q9HCK5 861 aaKnown RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 VPS45Q9NRW7 570 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 FBXO28Q9NVF7 368 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 DACT1Q9NYF0 836 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 LRFN1Q9P244 771 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 SERGEFQ9UGK8 458 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 HERC5Q9UII4 1024 aaKnown RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 ASAP1Q9ULH1 1129 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 FZD4Q9ULV1 537 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 MAFFQ9ULX9 164 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 UBE2J1Q9Y385 318 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 TOP2BQ02880 1626 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 AOX1Q06278 1338 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 SPATA31A6Q5VVP1 1343 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 SYNJ1O43426 1573 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 TCRBV5S1A1TA0A578 114 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 LRRC3CA6NJW4 275 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 CA12O43570 354 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 GCATO75600 419 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 USP1O94782 785 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 DUSP1P28562 367 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 TRAPPC10P48553 1259 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 JAK3P52333 1124 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 CBFBQ13951 182 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 LARS2Q15031 903 aaKnown RBP3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 FAM187BQ17R55 369 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 CERKLQ49MI3 558 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 TANGO2Q6ICL3 276 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 RINT1Q6NUQ1 792 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 ERAP2Q6P179 960 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 MSANTD2Q6P1R3 559 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 TMEM65Q6PI78 240 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 DCDC5Q6ZRR9 648 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 KRT27Q7Z3Y8 459 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 TRABD2AQ86V40 505 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 SEMA6DQ8NFY4 1073 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 OR52L2PQ8NGH6 319 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 MAFAQ8NHW3 353 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 MORC4Q8TE76 937 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 KAZALD1Q96I82 304 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 HIC2Q96JB3 615 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 HS6ST2Q96MM7 605 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 ASB2Q96Q27 587 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 ADGRE3Q9BY15 652 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 EPS8L2Q9H6S3 715 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 SAP30LQ9HAJ7 183 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 PTPRHQ9HD43 1115 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 FSCN3Q9NQT6 498 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 ASIC5Q9NY37 505 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 HMGXB3Q12766 1538 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 CFTRP13569 1480 aa3.78□□□□□ -1.8
HMGB1P41-201ENST00000520234 ERICH3Q5RHP9 1530 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 EFCAB8A8MWE9 144 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 TTC34A8MYJ7 566 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 CLIC1O00299 241 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 ACKR2O00590 384 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 FCHO1O14526 889 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 TPD52L2O43399 206 aaKnown RBP3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 DNPH1O43598 174 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 PRAMEF2O60811 474 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 PRKCGP05129 697 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 CD38P28907 300 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 CHKAP35790 457 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 IGHMBP2P38935 993 aaKnown RBP3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 GRK6P43250 576 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 CDK7P50613 346 aa3.77□□□□□ -1.81
HMGB1P41-201ENST00000520234 TUBA4AP68366 448 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms