RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 USP12O75317 370 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC43A1O75387 559 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 LY6G6DO95868 133 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 IFNA2P01563 188 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 IGLV3-19P01714 112 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 SRGAP2CP0DJJ0 459 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 VDRP11473 427 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 ENO3P13929 434 aaPredicted RBP-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 ALDH1A3P47895 512 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 FNTBP49356 437 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 SCNN1BP51168 640 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 HK3P52790 923 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC12A2P55011 1212 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 PIGFQ07326 219 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 SPOCK1Q08629 439 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 TRAF1Q13077 416 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 FAM110CQ1W6H9 321 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 SV2CQ496J9 727 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 GLIPR1L2Q4G1C9 344 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 HIGD2BQ4VC39 106 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 C19orf54Q5BKX5 351 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 FSCBQ5H9T9 825 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 GJC2Q5T442 439 aaPredicted RBP-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 DCAF12L1Q5VU92 463 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 KIAA1841Q6NSI8 718 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 TAPT1Q6NXT6 567 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 ARMCX5Q6P1M9 558 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZNF790Q6PG37 636 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 DCDC5Q6ZRR9 648 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 FAM178BQ8IXR5 827 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 TRMT2AQ8IZ69 625 aaKnown RBP-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 ADGRF4Q8IZF3 695 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 CISD2Q8N5K1 135 aaKnown RBP-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 TEX45Q8NA69 505 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 SNX33Q8WV41 574 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 CENPIQ92674 756 aaPredicted RBP-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 RASL10AQ92737 203 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 FAM104AQ969W3 186 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 R3HDM4Q96D70 268 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 OMA1Q96E52 524 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 HS6ST2Q96MM7 605 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 MYOCQ99972 504 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 FGF22Q9HCT0 170 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 KBTBD4Q9NVX7 518 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 MOCS1Q9NZB8 636 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 USP35Q9P2H5 1018 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 PRODH2Q9UF12 536 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 IL17BQ9UHF5 180 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZNF107Q9UII5 783 aaPredicted RBP-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 USP18Q9UMW8 372 aa-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 MRPS28Q9Y2Q9 187 aaKnown RBP-0.81□□□□□ -2.54
SNORA40.16-201ENST00000517238 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC22A23A1A5C7 686 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 C1orf226A1L170 272 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MBD3L4A6NDZ8 208 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MBD3L3A6NE82 208 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MBD3L5A6NJ08 208 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 FAM171A2A8MVW0 826 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 PRR32B1ATL7 298 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZSCAN9O15535 394 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 WISP3O95389 354 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MELTFP08582 738 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 SELLP14151 372 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 ARSBP15848 533 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 IL4RP24394 825 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 COPB1P53618 953 aaKnown RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 RIPK4P57078 832 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 NLRP5P59047 1200 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 ZBTB16Q05516 673 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 ITGA9Q13797 1035 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 DHX34Q14147 1143 aaKnown RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 BMS1Q14692 1282 aaKnown RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 KCNB1Q14721 858 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 FAM47CQ5HY64 1035 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 PIK3CD-AS1Q5SR53 167 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 TTC39AQ5SRH9 613 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 VPS53Q5VIR6 699 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 TIGD7Q6NT04 549 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 TRIM65Q6PJ69 517 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 VITQ6UXI7 678 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 NEK10Q6ZWH5 1172 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 KANSL1Q7Z3B3 1105 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 C14orf80Q86SX3 495 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MTDHQ86UE4 582 aaKnown RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 GLB1L2Q8IW92 636 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 C11orf42Q8N5U0 333 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 RBBP8NLQ8NC74 664 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 DMBX1Q8NFW5 382 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 CMASQ8NFW8 434 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MBD3L2Q8NHZ7 208 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 BCAS4Q8TDM0 211 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 NPIPB3Q92617 1050 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 EME1Q96AY2 570 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 LRIG1Q96JA1 1093 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MAP3K14Q99558 947 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 IER2Q9BTL4 223 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 AAMDCQ9H7C9 122 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 MAGEE1Q9HCI5 957 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 INPP5EQ9NRR6 644 aa-0.82□□□□□ -2.54
SNORA40.16-201ENST00000517238 SLC23A1Q9UHI7 598 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms