RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 BDNFP23560 247 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 OVGP1Q12889 678 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 KLHL24Q6TFL4 600 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 ERP27Q96DN0 273 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 INTS13Q9NVM9 706 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 MTO1Q9Y2Z2 717 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 RPN2P04844 631 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PDK2Q15119 407 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TXNRD3Q86VQ6 643 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 EPHX4Q8IUS5 362 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 ZSWIM2Q8NEG5 633 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 RXFP2Q8WXD0 754 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 RBM12Q9NTZ6 932 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 PIH1D1Q9NWS0 290 aaKnown RBP11.31□□□□□ -0.6
TRIM41-209ENST00000515834 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
TRIM41-209ENST00000515834 NCF4Q15080 339 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 PCNX4Q63HM2 1172 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 SMARCD1Q96GM5 515 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 TRIM8Q9BZR9 551 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 DRG1Q9Y295 367 aaKnown RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 TRAV19A0A0A6YYK7 116 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 TMEM120BA0PK00 339 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 SERPINF2P08697 491 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 DSELQ8IZU8 1212 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 ASZ1Q8WWH4 475 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 PPP1R16AQ96I34 528 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 ZDHHC15Q96MV8 337 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 LRRC40Q9H9A6 602 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 DCDC2Q9UHG0 476 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 CCDC130P13994 396 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF24P17028 368 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 GRIK3Q13003 919 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 FAAH2Q6GMR7 532 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 COLGALT1Q8NBJ5 622 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 FBXO36Q8NEA4 188 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 SLC24A3Q9HC58 644 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 SMNDC1O75940 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 IFNA14P01570 189 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 PLEKP08567 350 aaPredicted RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 JAK1P23458 1154 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 CYP2F1P24903 491 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 FIBCD1Q8N539 461 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 WDR36Q8NI36 951 aaKnown RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 RSPH1Q8WYR4 309 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 S100A13Q99584 98 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 TRAF2Q12933 501 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 SNX30Q5VWJ9 437 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
TRIM41-209ENST00000515834 CYP4Z2PQ8N1L4 340 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 A2ML1A8K2U0 1454 aa11.3□□□□□ -0.6
TRIM41-209ENST00000515834 BAIAP3O94812 1187 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 USP17L7P0C7H9 530 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 GSSP48637 474 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 OTUD4Q01804 1114 aaKnown RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 BIKQ13323 160 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 WDR24Q96S15 920 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 FKTNO75072 461 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 NDST1P52848 882 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 HNRNPH2P55795 449 aaKnown RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SRSF11Q05519 484 aaKnown RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 CHRNB3Q05901 458 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 AGMOQ6ZNB7 445 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 NEK10Q6ZWH5 1172 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 BRSK2Q8IWQ3 736 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 FOXN3O00409 490 aaPredicted RBP11.29□□□□□ -0.6
TRIM41-209ENST00000515834 PSTPIP1O43586 416 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 PGK1P00558 417 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SLC26A2P50443 739 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 DEFA1P59665 94 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 DEFA3P59666 94 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ERVK-24P63145 666 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 PARGQ86W56 976 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 WDR49Q8IV35 697 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 ATG16L2Q8NAA4 619 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 CXorf40BQ96DE9 158 aa11.29□□□□□ -0.6
TRIM41-209ENST00000515834 KLHL1Q9NR64 748 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms