RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 SIX1Q15475 284 aaPredicted RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 ACSBG2Q5FVE4 666 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 EEF1DP3Q658K8 133 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 ANKS1BQ7Z6G8 1248 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 TDRD5Q8NAT2 981 aaKnown RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 ACSS2Q9NR19 701 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 RHBDL2Q9NX52 303 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 C3orf70A6NLC5 250 aaPredicted RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 PGM3O95394 542 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 MCF2P10911 925 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 TFE3P19532 575 aaPredicted RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 GSTT1P30711 240 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 PCSK7Q16549 785 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 SH3TC2Q8TF17 1288 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 SKA2Q8WVK7 121 aaPredicted RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 DDX18Q9NVP1 670 aaKnown RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 ERAP1Q9NZ08 941 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 BARX2Q9UMQ3 279 aaPredicted RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 CHADO15335 359 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 TCEA3O75764 348 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 MSX2P35548 267 aaPredicted RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 FDFT1P37268 417 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 PKNOX1P55347 436 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 MSS51Q4VC12 460 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 TNS4Q8IZW8 715 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 SLC44A1Q8WWI5 657 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 HTR3CQ8WXA8 447 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 CATSPER2Q96P56 530 aa10.53□□□□□ -0.72
SMG7-215ENST00000515829 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
SMG7-215ENST00000515829 CCNB1P14635 433 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 PMLP29590 882 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 KIZQ2M2Z5 673 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 DDIASQ8IXT1 998 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 TNIP3Q96KP6 325 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 CCT7Q99832 543 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 CYP4F12Q9HCS2 524 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 RUVBL2Q9Y230 463 aaKnown RBP10.52□□□□□ -0.72
SMG7-215ENST00000515829 ZNF711Q9Y462 761 aa10.52□□□□□ -0.72
SMG7-215ENST00000515829 ACKR2O00590 384 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SUPT3HO75486 399 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 CLPTM1O96005 669 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 GRK2P25098 689 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 ZNF143P52747 638 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 PHEXP78562 749 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 CACNB2Q08289 660 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 LPCAT4Q643R3 524 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SNRNP25Q9BV90 132 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 TCF7L2Q9NQB0 619 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SNCAIPQ9Y6H5 919 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 THRAP10827 490 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 GPX6P59796 221 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 TSPY1Q01534 308 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 YWHAHQ04917 246 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 MGAT5Q09328 741 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 TMEM132BQ14DG7 1078 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 METTL7BQ6UX53 244 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 FASTKD5Q7L8L6 764 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 TDRPQ86YL5 185 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 APLFQ8IW19 511 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 BANPQ8N9N5 519 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 ADAM32Q8TC27 787 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SNRNP27Q8WVK2 155 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 MAGEB5Q9BZ81 275 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 MRPL46Q9H2W6 279 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 XPNPEP3Q9NQH7 507 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 PNPOQ9NVS9 261 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 TSR3Q9UJK0 312 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 NCAM1P13591 858 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SP100P23497 879 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 PEX6Q13608 980 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SH3PXD2AQ5TCZ1 1133 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 ABHD15Q6UXT9 468 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 C4orf22Q6V702 233 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 BNC2Q6ZN30 1099 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 NET1Q7Z628 596 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 CRYGNQ8WXF5 182 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 ZNF560Q96MR9 790 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 CDRT15Q96T59 188 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 ACO2Q99798 780 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 ASCC2Q9H1I8 757 aaPredicted RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 GNGT2O14610 69 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 TRDMT1O14717 391 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 SMNDC1O75940 238 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMG7-215ENST00000515829 HNRNPCP07910 306 aaKnown RBP eCLIP10.52□□□□□ -0.734e-7■■□□□ 11.5
SMG7-215ENST00000515829 NME5P56597 212 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.73
SMG7-215ENST00000515829 OGDHQ02218 1023 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SNX32Q86XE0 403 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 MAB21L3Q8N8X9 362 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 PPP1R13LQ8WUF5 828 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 ECSITQ9BQ95 431 aa10.52□□□□□ -0.73
SMG7-215ENST00000515829 SPATA31A6Q5VVP1 1343 aa10.51□□□□□ -0.73
SMG7-215ENST00000515829 RNF103O00237 685 aa10.51□□□□□ -0.73
SMG7-215ENST00000515829 UGT1A9O60656 530 aa10.51□□□□□ -0.73
SMG7-215ENST00000515829 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMG7-215ENST00000515829 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
SMG7-215ENST00000515829 CYLC2Q14093 348 aaPredicted RBP10.51□□□□□ -0.73
SMG7-215ENST00000515829 SEL1L3Q68CR1 1132 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms