RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 MFHAS1Q9Y4C4 1052 aa16.01■□□□□ 0.15
THUMPD3-210ENST00000515662 PTPRDP23468 1912 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 TADA2AO75478 443 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 OR4Q2P0C623 313 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 ARL4CP56559 192 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 BASP1P80723 227 aaKnown RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 GUCY1A3Q02108 690 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 SCAPQ12770 1279 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 PDIA2Q13087 525 aaKnown RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 SLC39A12Q504Y0 691 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 SLC45A4Q5BKX6 768 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 SCAMP5Q8TAC9 235 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 LRRN4Q8WUT4 740 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 ANLNQ9NQW6 1124 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 DTLQ9NZJ0 730 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 SLC12A6Q9UHW9 1150 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 XPO7Q9UIA9 1087 aaKnown RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 I6L893 689 aaPredicted RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 IVLP07476 585 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 MDH1P40925 334 aaKnown RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 GATMP50440 423 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 HP1BP3Q5SSJ5 553 aaPredicted RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 FNBP1LQ5T0N5 605 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 ZBED8Q8IZ13 594 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 APBB2Q92870 758 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 QKIQ96PU8 341 aaKnown RBP eCLIP16■□□□□ 0.15
THUMPD3-210ENST00000515662 STMN4Q9H169 189 aaPredicted RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 DYNC1LI1Q9Y6G9 523 aaKnown RBP16■□□□□ 0.15
THUMPD3-210ENST00000515662 PATJQ8NI35 1801 aa16■□□□□ 0.15
THUMPD3-210ENST00000515662 VGLL3A8MV65 326 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 TNFRSF10BO14763 440 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 EIF3HO15372 352 aaKnown RBP eCLIP15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 F9P00740 461 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 CCL5P13501 91 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 GRIK1P39086 918 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 KCNJ11Q14654 390 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 KCNT2Q6UVM3 1135 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM43BQ6ZT52 329 aaPredicted RBP15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 OLFM3Q96PB7 478 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 RNF208Q9H0X6 261 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 SYN3O14994 580 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 CREB3O43889 395 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 DGKIO75912 1065 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 AMHP03971 560 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 CXCR3P49682 368 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 DPYSQ14117 519 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 STAT4Q14765 748 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 MSS51Q4VC12 460 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 VARS2Q5ST30 1063 aaKnown RBP15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 RFX8Q6ZV50 586 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 CCDC13Q8IYE1 715 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 DCP1BQ8IZD4 617 aaKnown RBP15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 CRIPAKQ8N1N5 446 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 CCDC33Q8N5R6 958 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 COLEC11Q9BWP8 271 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 RAB6BQ9NRW1 208 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 LRFN2Q9ULH4 789 aa15.99■□□□□ 0.15
THUMPD3-210ENST00000515662 A0A087WUV0 522 aaPredicted RBP15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 E7ESA3 106 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM72CH0Y354 149 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 CHADO15335 359 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 BANF1O75531 89 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 SLC5A3P53794 718 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 SEMA3BQ13214 749 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM72AQ5TYM5 149 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM72DQ6L9T8 149 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 BEND5Q7L4P6 421 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 TAC4Q86UU9 113 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM72BQ86X60 149 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 CCDC77Q9BR77 488 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 TRIM62Q9BVG3 475 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 ABI2Q9NYB9 513 aaPredicted RBP15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 ADAM28Q9UKQ2 775 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 SF3B1O75533 1304 aaKnown RBP eCLIP15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 EEF2KO00418 725 aaKnown RBP15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 MFSD11O43934 449 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 GCATO75600 419 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 BZW1Q7L1Q6 419 aaKnown RBP15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 ANKMY2Q8IV38 441 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 CCDC110Q8TBZ0 833 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 SCLYQ96I15 445 aa15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 ZMYND8Q9ULU4 1186 aaPredicted RBP15.98■□□□□ 0.15
THUMPD3-210ENST00000515662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 HACD1B0YJ81 288 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 LSP1P33241 339 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 PPARDQ03181 441 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 PAFAH1B3Q15102 231 aaKnown RBP15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 NFE2Q16621 373 aaPredicted RBP15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 ARL13BQ3SXY8 428 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 FAM171A1Q5VUB5 890 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 C4orf22Q6V702 233 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 ANKRD33Q7Z3H0 272 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 PDIK1LQ8N165 341 aa15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 DQX1Q8TE96 717 aaKnown RBP15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 TFB1MQ8WVM0 346 aaKnown RBP15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 WDR83Q9BRX9 315 aaKnown RBP15.97■□□□□ 0.15
THUMPD3-210ENST00000515662 HIPK3Q9H422 1215 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms