RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C16orf46Q6P387 395 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 ISLR2Q6UXK2 745 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 THNSL1Q8IYQ7 743 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 TMEM102Q8N9M5 508 aaPredicted RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 ACTL9Q8TC94 416 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 STARD8Q92502 1023 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 C12orf43Q96C57 262 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 MFSD14AQ96MC6 490 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 ZNF778Q96MU6 729 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 DOK1Q99704 481 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 PKP2Q99959 881 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 CAAP1Q9H8G2 361 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 DOLKQ9UPQ8 538 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 HEMK1Q9Y5R4 338 aaPredicted RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 K7EPI3 171 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 GPR25O00155 361 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 XPO1O14980 1071 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 ZBTB39O15060 712 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 BCAS2O75934 225 aaPredicted RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 CALB1P05937 261 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 MCF2P10911 925 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 PROZP22891 400 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 BASP1P80723 227 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 NSUN2Q08J23 767 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 GRIK5Q16478 980 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 RGS21Q2M5E4 152 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 ANKDD1AQ495B1 522 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 ZNF362Q5T0B9 420 aaPredicted RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 LILRA2Q8N149 483 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 KYQ8NBH2 561 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 TBC1D15Q8TC07 691 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 PDCD6IPQ8WUM4 868 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 TRUB1Q8WWH5 349 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 HSPH1Q92598 858 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 LRRC39Q96DD0 335 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 CCDC138Q96M89 665 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 MRPL46Q9H2W6 279 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 RABL2BQ9UNT1 228 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 AGTPBP1Q9UPW5 1226 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 SLC30A1Q9Y6M5 507 aa13.2□□□□□ -0.3
SMAD1-215ENST00000515385 ZNFX1Q9P2E3 1918 aaKnown RBP13.2□□□□□ -0.3
SMAD1-215ENST00000515385 MYH14Q7Z406 1995 aaKnown RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 FAM155AB1AL88 458 aaPredicted RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 TISP43B9A030 160 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 GAS7O60861 476 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 KRT34O76011 436 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 KCNA4P22459 653 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 NDST2P52849 883 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 GDF10P55107 478 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 PIGGQ5H8A4 983 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 WDR44Q5JSH3 913 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 FAXCQ5TGI0 409 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 C15orf52Q6ZUT6 534 aaKnown RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 HAUS6Q7Z4H7 955 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 CBWD2Q8IUF1 395 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 TNIP2Q8NFZ5 429 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 HGH1Q9BTY7 390 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 OLAHQ9NV23 265 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 TRNAU1APQ9NX07 287 aaKnown RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 SEPT3Q9UH03 358 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 CDK5RAP2Q96SN8 1893 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 CHMP2AO43633 222 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 GLRA3O75311 464 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 OXSR1O95747 527 aaPredicted RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 TFPTP0C1Z6 253 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 FGF3P11487 239 aaPredicted RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 ME2P23368 584 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 ADSLP30566 484 aaPredicted RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 KCNJ11Q14654 390 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 ATP2A3Q93084 1043 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 ANKRD60Q9BZ19 345 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 MRPL40Q9NQ50 206 aaKnown RBP13.19□□□□□ -0.3
SMAD1-215ENST00000515385 TMEM9Q9P0T7 183 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 GAKO14976 1311 aa13.19□□□□□ -0.3
SMAD1-215ENST00000515385 RGSL1A5PLK6 1076 aa13.18□□□□□ -0.3
SMAD1-215ENST00000515385 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
SMAD1-215ENST00000515385 TRIM64BA6NI03 449 aa13.18□□□□□ -0.3
SMAD1-215ENST00000515385 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms