RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 E7ENQ6 273 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 I3L4J1 428 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 M0QYT0 321 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 SGK1O00141 431 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 ALOX15BO15296 676 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 POLR3GO15318 223 aaPredicted RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 B4GALT3O60512 393 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 TADA2AO75478 443 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 EFEMP2O95967 443 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 IGLV3-25P01717 112 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 ITGB1P05556 798 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 TSHRP16473 764 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 TFE3P19532 575 aaPredicted RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 BDNFP23560 247 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 CYP2F1P24903 491 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 HTR7P34969 479 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 ARL4AP40617 200 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 MAGEA6P43360 314 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 CXCR3P49682 368 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 SULT1E1P49888 294 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 CACNA2D1P54289 1103 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 RNASELQ05823 741 aaKnown RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 DEUP1Q05D60 604 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 SEMA3BQ13214 749 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 PPIGQ13427 754 aaKnown RBP eCLIP10.59□□□□□ -0.712e-10■□□□□ 9.9
SNF8-214ENST00000515174 SLC29A2Q14542 456 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 CA9Q16790 459 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 P3H1Q32P28 736 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 ARL13BQ3SXY8 428 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 ZC3H12AQ5D1E8 599 aaKnown RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 TNFAIP8L3Q5GJ75 292 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 CEP85LQ5SZL2 805 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 RNASEH2BQ5TBB1 312 aaKnown RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 MFSD5Q6N075 450 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 SPATA2LQ8IUW3 424 aaPredicted RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 FAM76AQ8TAV0 307 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 C2orf15Q8WU43 125 aaKnown RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 RIN2Q8WYP3 895 aaPredicted RBP10.59□□□□□ -0.71
SNF8-214ENST00000515174 ARL8AQ96BM9 186 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 TTC25Q96NG3 672 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 CSPG4P5Q96PW8 444 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 TMEM121Q9BTD3 319 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 OSBPL2Q9H1P3 480 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 PPCSQ9HAB8 311 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 ABCC13Q9NSE7 274 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 VPS18Q9P253 973 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 PAK5Q9P286 719 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 PLXNA4Q9HCM2 1894 aa10.59□□□□□ -0.71
SNF8-214ENST00000515174 PTPRDP23468 1912 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 C5orf60A6NFR6 353 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 SRRM3A6NNA2 597 aaPredicted RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 GRXCR1A8MXD5 290 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 E7ESA3 106 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 H3BRJ5 948 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 H7C4K7 107 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 CAPN9O14815 690 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 TRIM66O15016 1216 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 GCATO75600 419 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 DGKIO75912 1065 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 PECAM1P16284 738 aaPredicted RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 RPL22P35268 128 aaKnown RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 PBX2P40425 430 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 OR1G1P47890 313 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 ROR1Q01973 937 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 GPS1Q13098 491 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 RASA2Q15283 850 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 TTMPQ5BVD1 217 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 SYPL2Q5VXT5 272 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 BSPRYQ5W0U4 402 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 HFE2Q6ZVN8 426 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 GPRIN1Q7Z2K8 1008 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 MON1AQ86VX9 555 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 CDKL3Q8IVW4 592 aaPredicted RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 UNC45BQ8IWX7 931 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 PPIL6Q8IXY8 311 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 ARHGAP18Q8N392 663 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 MICALL1Q8N3F8 863 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 ZNF276Q8N554 614 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 ARFGAP2Q8N6H7 521 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 NAT8LQ8N9F0 302 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 GLIS1Q8NBF1 620 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 TLCD1Q96CP7 247 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 SERPINB12Q96P63 405 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 KCTD15Q96SI1 283 aaPredicted RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 BRD8Q9H0E9 1235 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 FBXO44Q9H4M3 255 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 DHX35Q9H5Z1 703 aaKnown RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 FAM204AQ9H8W3 233 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 CWC15Q9P013 229 aaKnown RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 MSRAQ9UJ68 235 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 LRFN2Q9ULH4 789 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 NAALADL1Q9UQQ1 740 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 SPTBN5Q9NRC6 3674 aaKnown RBP10.58□□□□□ -0.72
SNF8-214ENST00000515174 PATJQ8NI35 1801 aa10.58□□□□□ -0.72
SNF8-214ENST00000515174 CHADO15335 359 aa10.57□□□□□ -0.72
SNF8-214ENST00000515174 NCAM2O15394 837 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms