RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CRLS1Q9UJA2 301 aa13.65□□□□□ -0.23
TCOF1-214ENST00000515035 MKL2Q9ULH7 1088 aa13.65□□□□□ -0.23
TCOF1-214ENST00000515035 BTBD3Q9Y2F9 522 aa13.65□□□□□ -0.23
TCOF1-214ENST00000515035 MRASO14807 208 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 PDE9AO76083 593 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 PGM3O95394 542 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 ADRA1DP25100 572 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 FLT3P36888 993 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 ELK3P41970 407 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 KCNJ2P63252 427 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CNTN1Q12860 1018 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CCDC153Q494R4 210 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 USP39Q53GS9 565 aaKnown RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 SLC45A4Q5BKX6 768 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CREG2Q8IUH2 290 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 EID3Q8N140 333 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 WDR36Q8NI36 951 aaKnown RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 FAM45AQ8TCE6 357 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 HPDLQ96IR7 371 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 APOL2Q9BQE5 337 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 GPAMQ9HCL2 828 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 TBX20Q9UMR3 447 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 RAD54BQ9Y620 910 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 TRIM43BA6NCK2 446 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 VPS26AO75436 327 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 ALOX15P16050 662 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 MAPK1P28482 360 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CBWD2Q8IUF1 395 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CHST13Q8NET6 341 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 RNF145Q96MT1 663 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 DGCR6LQ9BY27 220 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 LRRC4BQ9NT99 713 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 AAR2Q9Y312 384 aaKnown RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 UBE2Q2LH0YL09 131 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CES2O00748 559 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 SLC37A4O43826 429 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 GH1P01241 217 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 SSTR1P30872 391 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 ATP12AP54707 1039 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 HIST2H2ACQ16777 129 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 HIST2H2AA3Q6FI13 130 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 GPRC5AQ8NFJ5 357 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 FIG4Q92562 907 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 APOL4Q9BPW4 351 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 JMJD4Q9H9V9 463 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 GGA2Q9UJY4 613 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 PRR12Q9ULL5 1215 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 OPLAHO14841 1288 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CD4P01730 458 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 NR3C2P08235 984 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 GSTM1P09488 218 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CENPAP49450 140 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 FAM180AQ6UWF9 173 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 DCLK3Q9C098 648 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 CORO1CQ9ULV4 474 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-214ENST00000515035 DUSP12Q9UNI6 340 aa13.64□□□□□ -0.23
TCOF1-214ENST00000515035 SMIM31A0A1B0GVY4 71 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 M0QYT0 321 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 HS6ST1O60243 411 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 CYBBP04839 570 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 RASA1P20936 1047 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 PPP4CP60510 307 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 TROAPQ12815 778 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 FASTKQ14296 549 aaKnown RBP13.63□□□□□ -0.23
TCOF1-214ENST00000515035 NRF1Q16656 503 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 SH3BP5LQ7L8J4 393 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 UXS1Q8NBZ7 420 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 FAM136AQ96C01 138 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 SMARCAD1Q9H4L7 1026 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 DMAP1Q9NPF5 467 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-214ENST00000515035 AVENQ9NQS1 362 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-214ENST00000515035 GPATCH2LQ9NWQ4 482 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 ATP5BP06576 529 aaKnown RBP13.63□□□□□ -0.23
TCOF1-214ENST00000515035 CNGA2Q16280 664 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 ZSWIM2Q8NEG5 633 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 SPATA16Q9BXB7 569 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 TBC1D10AQ9BXI6 508 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 TMEM39BQ9GZU3 492 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 DDIT4Q9NX09 232 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 KLHL18O94889 574 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 EPB42P16452 691 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 RPL5P46777 297 aaKnown RBP13.63□□□□□ -0.23
TCOF1-214ENST00000515035 PGS1Q32NB8 556 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 TTC30AQ86WT1 665 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 NARS2Q96I59 477 aaKnown RBP13.63□□□□□ -0.23
TCOF1-214ENST00000515035 VTI1BQ9UEU0 232 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 NDUFAF1Q9Y375 327 aa13.63□□□□□ -0.23
TCOF1-214ENST00000515035 SRRM3A6NNA2 597 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-214ENST00000515035 ENTPD5O75356 428 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms