RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SDE2Q6IQ49 451 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 CHPFQ8IZ52 775 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 PGBD3Q8N328 593 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 GPT2Q8TD30 523 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 STK32AQ8WU08 396 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 P2RY11Q96G91 374 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 ARRDC1-AS1Q9H2J1 176 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 FBXO10Q9UK96 956 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 DMXL1Q9Y485 3027 aa25.56■■□□□ 1.68
SNF8-213ENST00000514929 TCRBV21S2A2A0A5A6 115 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 KCNJ18B7U540 433 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 NCAM1P13591 858 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 HOXB2P14652 356 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 RPL34P49207 117 aaKnown RBP25.55■■□□□ 1.68
SNF8-213ENST00000514929 KCNJ12Q14500 433 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 CSRP2Q16527 193 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 C11orf74Q86VG3 221 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 FAM217AQ8IXS0 508 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 HMGB4Q8WW32 186 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 FAM149B1Q96BN6 582 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 DUSP15Q9H1R2 295 aaPredicted RBP25.55■■□□□ 1.68
SNF8-213ENST00000514929 SIX2Q9NPC8 291 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 SAMSN1Q9NSI8 373 aaKnown RBP25.55■■□□□ 1.68
SNF8-213ENST00000514929 DNAJC12Q9UKB3 198 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 HCN2Q9UL51 889 aa25.55■■□□□ 1.68
SNF8-213ENST00000514929 PRR5-ARHGAP8B1AHC4 643 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 RHOBTB1O94844 696 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 EPN2O95208 641 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 ARHGAP8P85298 464 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 RSPO4Q2I0M5 234 aaPredicted RBP25.54■■□□□ 1.68
SNF8-213ENST00000514929 MPPE1Q53F39 396 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 MIIPQ5JXC2 388 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 ACOX2Q99424 681 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 SLC4A5Q9BY07 1137 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 SLC27A6Q9Y2P4 619 aa25.54■■□□□ 1.68
SNF8-213ENST00000514929 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.54■■□□□ 1.68
SNF8-213ENST00000514929 TSPAN3O60637 253 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 LATS1O95835 1130 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 ZNF445P59923 1031 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 PTK2Q05397 1052 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 UNC45BQ8IWX7 931 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 TRIM62Q9BVG3 475 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 CYTH4Q9UIA0 394 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 AJAP1Q9UKB5 411 aaPredicted RBP25.53■■□□□ 1.68
SNF8-213ENST00000514929 NFE2L3Q9Y4A8 694 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 SPAG17Q6Q759 2223 aa25.53■■□□□ 1.68
SNF8-213ENST00000514929 E5RJQ4 531 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 ZBTB24O43167 697 aaPredicted RBP25.52■■□□□ 1.68
SNF8-213ENST00000514929 SDHBP21912 280 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 EEF1GP26641 437 aaKnown RBP25.52■■□□□ 1.68
SNF8-213ENST00000514929 TBX4P57082 545 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 PUM1Q14671 1186 aaKnown RBP eCLIP25.52■■□□□ 1.68
SNF8-213ENST00000514929 GEN1Q17RS7 908 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 ADGRF1Q5T601 910 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 NUGGCQ68CJ6 796 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 SMYD5Q6GMV2 418 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 PRR23CQ6ZRP0 262 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 OLIG1Q8TAK6 271 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 SPACA7Q96KW9 195 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 SLC2A11Q9BYW1 496 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 STOML2Q9UJZ1 356 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 CDV3Q9UKY7 258 aaKnown RBP25.52■■□□□ 1.68
SNF8-213ENST00000514929 PCDHGA5Q9Y5G8 931 aa25.52■■□□□ 1.68
SNF8-213ENST00000514929 MYO18AQ92614 2054 aaKnown RBP25.51■■□□□ 1.67
SNF8-213ENST00000514929 CAPN9O14815 690 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 PAPSS1O43252 624 aaPredicted RBP25.51■■□□□ 1.67
SNF8-213ENST00000514929 FOXD2O60548 495 aaPredicted RBP25.51■■□□□ 1.67
SNF8-213ENST00000514929 IGLV3-27P01718 113 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 FYNP06241 537 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 SLC11A2P49281 568 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 RING1Q06587 406 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 PDCLQ13371 301 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 CCDC6Q16204 474 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 TCP11X2Q5H9J9 407 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 ANKS1BQ7Z6G8 1248 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 TMEM110Q86TL2 294 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 PASD1Q8IV76 773 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 ENOX1Q8TC92 643 aaKnown RBP25.51■■□□□ 1.67
SNF8-213ENST00000514929 DQX1Q8TE96 717 aaKnown RBP25.51■■□□□ 1.67
SNF8-213ENST00000514929 UCMAQ8WVF2 138 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 RLN3Q8WXF3 142 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 TMA16Q96EY4 203 aaKnown RBP25.51■■□□□ 1.67
SNF8-213ENST00000514929 SERPINB11Q96P15 392 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 CACNA2D2Q9NY47 1150 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 DLL3Q9NYJ7 618 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 NAALADL1Q9UQQ1 740 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 RALGAPA1Q6GYQ0 2036 aa25.51■■□□□ 1.67
SNF8-213ENST00000514929 FOXN3O00409 490 aaPredicted RBP25.5■■□□□ 1.67
SNF8-213ENST00000514929 BCKDHBP21953 392 aa25.5■■□□□ 1.67
SNF8-213ENST00000514929 RBM43Q6ZSC3 357 aaKnown RBP25.5■■□□□ 1.67
SNF8-213ENST00000514929 PIWIL1Q96J94 861 aaKnown RBP25.5■■□□□ 1.67
SNF8-213ENST00000514929 GABRG3Q99928 467 aa25.5■■□□□ 1.67
SNF8-213ENST00000514929 CLEC4EQ9ULY5 219 aa25.5■■□□□ 1.67
SNF8-213ENST00000514929 PCDHGC3Q9UN70 934 aa25.5■■□□□ 1.67
SNF8-213ENST00000514929 A0A1W2PQF6 199 aa25.49■■□□□ 1.67
SNF8-213ENST00000514929 GFRA2O00451 464 aa25.49■■□□□ 1.67
SNF8-213ENST00000514929 PNMA6AP0CW24 399 aaPredicted RBP25.49■■□□□ 1.67
SNF8-213ENST00000514929 GABRG2P18507 467 aa25.49■■□□□ 1.67
SNF8-213ENST00000514929 HOXD9P28356 352 aaPredicted RBP25.49■■□□□ 1.67
SNF8-213ENST00000514929 KRT9P35527 623 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms