RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 TMEM59LQ9UK28 342 aa14.86□□□□□ -0.03
NUP54-216ENST00000514901 AGO1Q9UL18 857 aaKnown RBP14.86□□□□□ -0.03
NUP54-216ENST00000514901 TICRRQ7Z2Z1 1910 aa14.86□□□□□ -0.03
NUP54-216ENST00000514901 FAM86C2PA6NEL3 165 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 AKR1B15C9JRZ8 316 aaPredicted RBP14.85□□□□□ -0.03
NUP54-216ENST00000514901 GOLGA8SH3BPF8 625 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 TRDMT1O14717 391 aaKnown RBP14.85□□□□□ -0.03
NUP54-216ENST00000514901 IRAK2O43187 625 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 MSI1O43347 362 aaKnown RBP14.85□□□□□ -0.03
NUP54-216ENST00000514901 RTN2O75298 545 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 F9P00740 461 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 FTLP02792 175 aaPredicted RBP14.85□□□□□ -0.03
NUP54-216ENST00000514901 CYP17A1P05093 508 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 KRT3P12035 628 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 EIF4EBP2Q13542 120 aaPredicted RBP14.85□□□□□ -0.03
NUP54-216ENST00000514901 PREPLQ4J6C6 727 aaPredicted RBP14.85□□□□□ -0.03
NUP54-216ENST00000514901 C2CD6Q53TS8 623 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 LY6G5CQ5SRR4 150 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 CPXM2Q8N436 756 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 C3orf20Q8ND61 904 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 NT5C3BQ969T7 300 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 TRIM11Q96F44 468 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 SLC39A13Q96H72 371 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 SELENOOQ9BVL4 669 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 FAM204AQ9H8W3 233 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 LTB4R2Q9NPC1 389 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.85□□□□□ -0.03
NUP54-216ENST00000514901 ADAMTS1Q9UHI8 967 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 STOML2Q9UJZ1 356 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 SIT1Q9Y3P8 196 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 PAXBP1Q9Y5B6 917 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 MYOFQ9NZM1 2061 aa14.85□□□□□ -0.03
NUP54-216ENST00000514901 SSU72P8A0A1W2PR75 194 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 ANKRD62A6NC57 917 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 SIGLEC16A6NMB1 481 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 FAM170BA6NMN3 283 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 SCAMP3O14828 347 aaKnown RBP14.84□□□□□ -0.03
NUP54-216ENST00000514901 HOXC11O43248 304 aaPredicted RBP14.84□□□□□ -0.03
NUP54-216ENST00000514901 MFAP3LO75121 409 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 PDGFBP01127 241 aaPredicted RBP14.84□□□□□ -0.03
NUP54-216ENST00000514901 APOEP02649 317 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 MYBL1P10243 752 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 ADH5P11766 374 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 AOC1P19801 751 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 CCR1P32246 355 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 EIF2DP41214 584 aaKnown RBP14.84□□□□□ -0.03
NUP54-216ENST00000514901 MAGEA9P43362 315 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 SOX9P48436 509 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 GRSF1Q12849 480 aaKnown RBP eCLIP14.84□□□□□ -0.03
NUP54-216ENST00000514901 UBXN2BQ14CS0 331 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 SLC25A52Q3SY17 297 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 ADGRF1Q5T601 910 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 SND1Q7KZF4 910 aaKnown RBP eCLIP14.84□□□□□ -0.03
NUP54-216ENST00000514901 FAM217AQ8IXS0 508 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 OLIG1Q8TAK6 271 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 ADAM32Q8TC27 787 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 PGAP3Q96FM1 320 aaPredicted RBP14.84□□□□□ -0.03
NUP54-216ENST00000514901 FCRL2Q96LA5 508 aaPredicted RBP14.84□□□□□ -0.03
NUP54-216ENST00000514901 NPY6RQ99463 290 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 LRFN3Q9BTN0 628 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 ISCUQ9H1K1 167 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 ABHD10Q9NUJ1 306 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 DDIT4Q9NX09 232 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 TAS2R14Q9NYV8 317 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 MARK1Q9P0L2 795 aa14.84□□□□□ -0.03
NUP54-216ENST00000514901 SHISA7A6NL88 538 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 TMCO5BA8MYB1 307 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.83□□□□□ -0.04
NUP54-216ENST00000514901 M0QYT0 321 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 ACSL4O60488 711 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 CYBBP04839 570 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 PDGFRAP16234 1089 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 DRD1P21728 446 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 NUBP1P53384 320 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 ADKP55263 362 aaKnown RBP14.83□□□□□ -0.04
NUP54-216ENST00000514901 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
NUP54-216ENST00000514901 LRRC32Q14392 662 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 PPP2R5DQ14738 602 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 ANO4Q32M45 955 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 DGKKQ5KSL6 1271 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 CWF19L1Q69YN2 538 aaKnown RBP14.83□□□□□ -0.04
NUP54-216ENST00000514901 DNAJC24Q6P3W2 148 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 WDR59Q6PJI9 974 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 TMEM25Q86YD3 366 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 ATP6V0D2Q8N8Y2 350 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 PJA1Q8NG27 643 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 CCDC26Q8TAB7 109 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 CD101Q93033 1021 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 RNF34Q969K3 372 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 BTN2A3PQ96KV6 586 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 XPO6Q96QU8 1125 aaKnown RBP14.83□□□□□ -0.04
NUP54-216ENST00000514901 P2RY13Q9BPV8 354 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 METTL5Q9NRN9 209 aaKnown RBP14.83□□□□□ -0.04
NUP54-216ENST00000514901 PARVAQ9NVD7 372 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 ARHGAP20Q9P2F6 1191 aa14.83□□□□□ -0.04
NUP54-216ENST00000514901 FAM170AA1A519 330 aa14.82□□□□□ -0.04
NUP54-216ENST00000514901 C2CD4BA6NLJ0 364 aa14.82□□□□□ -0.04
NUP54-216ENST00000514901 KCNU1A8MYU2 1149 aa14.82□□□□□ -0.04
NUP54-216ENST00000514901 PLEKP08567 350 aaPredicted RBP14.82□□□□□ -0.04
NUP54-216ENST00000514901 DESP17661 470 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms