RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 IL21Q9HBE4 155 aa21.07■□□□□ 0.96
USP53-208ENST00000514305 GMIPQ9P107 970 aa21.07■□□□□ 0.96
USP53-208ENST00000514305 TRAV19A0A0A6YYK7 116 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 ANKRD62A6NC57 917 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 SPECC1L-ADORA2AF8WAN1 911 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 PRAMEF12O95522 483 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 LTFP02788 710 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 FTLP02792 175 aaPredicted RBP21.06■□□□□ 0.96
USP53-208ENST00000514305 ZDHHC11BP0C7U3 371 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 CHRNB1P11230 501 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 AVPR1AP37288 418 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 SLC6A3Q01959 620 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 SPA17Q15506 151 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 RSRC2Q7L4I2 434 aaKnown RBP21.06■□□□□ 0.96
USP53-208ENST00000514305 BEND5Q7L4P6 421 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 TXLNBQ8N3L3 684 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 CELF5Q8N6W0 485 aaKnown RBP21.06■□□□□ 0.96
USP53-208ENST00000514305 ZFYVE19Q96K21 471 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 EPC1Q9H2F5 836 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 CYTH4Q9UIA0 394 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 OTOGLQ3ZCN5 2332 aa21.06■□□□□ 0.96
USP53-208ENST00000514305 TMCO5BA8MYB1 307 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 PIK3R2O00459 728 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 LILRB5O75023 590 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 HSF2BPO75031 334 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 ATP5C1P36542 298 aaKnown RBP21.05■□□□□ 0.96
USP53-208ENST00000514305 SOX9P48436 509 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 GSCP56915 257 aaPredicted RBP21.05■□□□□ 0.96
USP53-208ENST00000514305 YWHAZP63104 245 aaKnown RBP21.05■□□□□ 0.96
USP53-208ENST00000514305 BSPRYQ5W0U4 402 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 MCOLN2Q8IZK6 566 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 CMTM8Q8IZV2 173 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 DCLK2Q8N568 766 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 TTC8Q8TAM2 541 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 CHP1Q99653 195 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 C11orf70Q9BRQ4 267 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 ISCUQ9H1K1 167 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 POPDC2Q9HBU9 364 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 TRPC7Q9HCX4 862 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 MRPL47Q9HD33 250 aaKnown RBP21.05■□□□□ 0.96
USP53-208ENST00000514305 RRN3Q9NYV6 651 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 GTSE1Q9NYZ3 720 aa21.05■□□□□ 0.96
USP53-208ENST00000514305 SMG5Q9UPR3 1016 aaKnown RBP21.05■□□□□ 0.96
USP53-208ENST00000514305 A0A087X0T9 212 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 A0A1W2PQH9 124 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 PAPSS1O43252 624 aaPredicted RBP21.04■□□□□ 0.96
USP53-208ENST00000514305 ERBB2P04626 1255 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 PLEKP08567 350 aaPredicted RBP21.04■□□□□ 0.96
USP53-208ENST00000514305 FAM228BP0C875 321 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 RARGP13631 454 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 HOXB1P14653 301 aaPredicted RBP21.04■□□□□ 0.96
USP53-208ENST00000514305 HDCP19113 662 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 CTHP32929 405 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 CXCL12P48061 93 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 DGKKQ5KSL6 1271 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 FAM102AQ5T9C2 384 aaPredicted RBP21.04■□□□□ 0.96
USP53-208ENST00000514305 KLHDC10Q6PID8 442 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 MMS22LQ6ZRQ5 1243 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 SLC26A9Q7LBE3 791 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 LRRC3BQ96PB8 259 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 SELENOOQ9BVL4 669 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 SLC46A2Q9BY10 475 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 PARVAQ9NVD7 372 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 RAB23Q9ULC3 237 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 SCINQ9Y6U3 715 aa21.04■□□□□ 0.96
USP53-208ENST00000514305 TLR5O60602 858 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 CKMP06732 381 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 FECHP22830 423 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 FAM183BPQ6ZVS7 135 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 MON1BQ7L1V2 547 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 ARCQ7LC44 396 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 DDX42Q86XP3 938 aaKnown RBP eCLIP21.03■□□□□ 0.96
USP53-208ENST00000514305 XYLT1Q86Y38 959 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 SPEM1Q8N4L4 309 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 GPR161Q8N6U8 529 aaKnown RBP21.03■□□□□ 0.96
USP53-208ENST00000514305 MAB21L3Q8N8X9 362 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 SMG9Q9H0W8 520 aaKnown RBP21.03■□□□□ 0.96
USP53-208ENST00000514305 KIF9Q9HAQ2 790 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 DNMT3LQ9UJW3 386 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 DMXL1Q9Y485 3027 aa21.03■□□□□ 0.96
USP53-208ENST00000514305 DCHS1Q96JQ0 3298 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 YJEFN3A6XGL0 299 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 E7ENQ6 273 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 H2AFZP0C0S5 128 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 KRT3P12035 628 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 NCAM1P13591 858 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 KRT83P78385 493 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 GFPT1Q06210 699 aaPredicted RBP21.02■□□□□ 0.96
USP53-208ENST00000514305 CCDC173Q0VFZ6 552 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 ASTE1Q2TB18 679 aaPredicted RBP21.02■□□□□ 0.96
USP53-208ENST00000514305 ITPRIPL2Q3MIP1 535 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 C10orf120Q5SQS8 335 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 TXNDC8Q6A555 127 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 DNAJC24Q6P3W2 148 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 TXNDC11Q6PKC3 985 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 H2AFVQ71UI9 128 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 TMEM150AQ86TG1 271 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 C3orf20Q8ND61 904 aa21.02■□□□□ 0.96
USP53-208ENST00000514305 CTNNBL1Q8WYA6 563 aaPredicted RBP21.02■□□□□ 0.96
USP53-208ENST00000514305 RMDN1Q96DB5 314 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms